Paenibacillus ihbetae: BBD41_18320
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Entry
BBD41_18320 CDS
T05154
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03090
RNA polymerase sigma-B factor
Organism
pib
Paenibacillus ihbetae
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pib03021
]
BBD41_18320
Transcription machinery [BR:
pib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBD41_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_r2
HTH_23
GerE
HTH_Tnp_ISL3
HTH_38
Sigma70_ECF
HTH_50
KORA
HTH_29
MarR_2
HTH_28
HTH_24
HTH_31
HTH_10
TnsD
MarR
HTH_3
CENP-B_N
Phage_antitermQ
HTH_11
HTH_7
DUF1492
Motif
Other DBs
NCBI-ProteinID:
ANY74373
UniProt:
A0A1B2E334
LinkDB
All DBs
Position
4179313..4180083
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AA seq
256 aa
AA seq
DB search
MNDKATPPESRDEAVDLIREYQQTKDNDVATVLIQKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELMVKLERSPDVKEIADYLDLSVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDVNDFDSVEKRMDLQQAMSQLKEQEQKVLLLAFQEGQSQRAIAQRLGVSQMSVSRIQ
KRATEKLKQIMSSNSY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataaggcgactcccccagagtccagagatgaagccgtagatttaatacgggaa
tatcagcagacgaaggataacgacgtcgcaaccgtgctgatacaaaaatatgagccgatg
gttaaaatggccgcagggaagatagctagaaatcgtcccgatctgtatgaggatttgtac
caagtgggtcaaatggctttgattcgcttgcttcaacagtatgatatcagcttagggatc
ccattcgaaccctatgccatgaagagcatgatcgggcatatgaagaatttcctccgcgac
aaatcttggtatattcaagtgccgcggcgaatcaaggagaagggggccttggtgcagcaa
gccattgatgaattaatggtgaagctcgagagatcccctgatgtaaaggaaattgcggat
tacttggatttatcggttgaagaaaccgttgaagtgctggccggacgcgaatgctatcat
tacgtatcattggattctcctttgtcccaggaagagacgggggccacgcttggcgagtta
atcagttcggatgtgaatgatttcgattccgtagagaagcgcatggatcttcaacaggcg
atgagccaattgaaggaacaggaacagaaggtgctgctgttggcatttcaggaggggcag
tcccagcgggctattgcccagcggctgggggtatcgcagatgagcgtttcccgaatccag
aaacgcgcaacggaaaaactgaaacaaatcatgtcgagcaattcctactga
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