Paenibacillus ihbetae: BBD41_19410 Help Entry BBD41_19410       CDS       T05154                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pib  Paenibacillus ihbetae Pathway pib03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pib00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     BBD41_19410  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pib03400]     BBD41_19410 Enzymes [BR:pib01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      BBD41_19410 DNA repair and recombination proteins [BR:pib03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      BBD41_19410 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C Motif Other DBs NCBI-ProteinID:  ANY74563 UniProt:  A0A1B2E3M5 LinkDB All DBs Position complement(4383987..4384892) Genome browser AA seq 301 aa AA seqDB search MGHLRELLPKEPMAPISTEKIEAGDDWGYQLKWDGVRILAGIDHQKVSLYSRKLLDKTSL YPEVVAALSKLQHDRLLLDGEVVYFHPELGRPVFQKVLQRERSRSVRSDAPHFTYVLFDI LVDGDKDMRKLPYLDRHHRLKEIVSNTPGILTADLFLEGESLWAWAEERGWEGIVMKRLS SPYREGKKHRDWYKKKIAITMQAEAVALIIREGRVASLVLADDENNYIGRASLGLNEQTK QRLLDYTGLHPAGAGWNTLHADLKKEQLAWLSKPLTATVTFLEWSQDGMMRHPKLLSIEG V NT seq 906 nt NT seq  +upstreamnt  +downstreamnt atgggacatttacgagagctgctgcctaaagagccgatggcgccgatctccacggagaag atcgaagccggcgacgattggggctatcaattgaagtgggacggggttcgtatccttgca ggcatcgaccaccagaaggtctccctctattcccggaagctgctggataagacgtccctc tatcccgaggtggttgccgcactgtcgaagctgcagcatgatcgtctgctcctggacggt gaagtggtttattttcatcccgagctgggacgcccggtgttccagaaggtactgcagcgg gaacgttctcgatcggttcggtcggacgccccgcatttcacgtatgtgctgtttgacatt ctggtcgacggcgataaggatatgcgtaagctgccctatcttgaccggcatcaccggctg aaagaaatcgtctccaatacgcccggaatcctgacggccgatctgttcctggaaggcgag agcctctgggcatgggccgaggaacgcgggtgggaaggaatcgttatgaaacggctctcc tccccttaccgtgaagggaagaagcaccgggactggtacaagaaaaagatcgccatcacc atgcaggcggaggctgtcgccttgatcataagagaaggccgtgtagccagccttgtgctg gctgacgatgagaacaactatatcggcagggcatcgcttggactgaacgaacagaccaag cagcggctgttagactatacaggtctgcatccggcaggtgccggctggaatacgctgcac gcagacctgaagaaggagcagctcgcttggctaagcaagccgctgaccgctacggttacc ttcctggagtggagccaggacggaatgatgcggcatccgaagctgctgtcgattgagggg gtgtaa

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