Paenibacillus ihbetae: BBD41_19765
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Entry
BBD41_19765 CDS
T05154
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib03420
Nucleotide excision repair
pib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBD41_19765
03430 Mismatch repair
BBD41_19765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_19765
Enzymes [BR:
pib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBD41_19765
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBD41_19765
MMR (mismatch excision repair)
Other MMR factors
BBD41_19765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANY74621
UniProt:
A0A1B2E3U6
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All DBs
Position
4451150..4453027
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AA seq
625 aa
AA seq
DB search
MLINNANRGSIESLLLGGSRQFQPEQIAVINSTHSTNIMACPGSGKTTVLIAKIALLLDK
IKKEGSRKGICVITHTNVAVEEIVSSLEKLGISNIMYPHFVGTIHEFFNTFFSMKAYGFY
TKKDAFYLLDNEEYKKYFERFFEYNKPGYWTYPTPVNAVDKTDIHIDENNQLHIISKREG
KDYSAPVLNTIQDMFCKGFIRHSDTVALANWYIRNHKAAIQKAFQNRFQYFFIDEAQDTS
IEQYENLSMLIENNNETIVQWFGDSYQALYSLYGKDDAWKPDLEESLQINFSNRFGENIA
RILRTTCIEEYSRLEANNTISSAVPHFFIYNDENKEQLLSVYSRIVSDFKAASLETVQIK
GKIAAVCHHHDSLEGYSKTYQRSKISKPLLSEMQACLHECHQSLVYALRKNDRREENGRS
EYLKNISQFLRDKYPSNYIEIKALWARWIKAISEETDESMILVDLEVKYRELITTTLNKD
NNDDIDVTKIHDLRPRLVKILQKNTRTEPTETATNTIPVGLAVELNTIHGVKGETHFATL
LLESVRDGVSDMQKIISFLTGTYQPELVEESLVKDSLKLAYVALSRPRYFVGVAMHEENL
SIQNIQDIERFGWRIVEVNDYLDIT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgctaattaataatgcaaatcgaggaagtatagaatccttgctgcttggcggcagccgg
caatttcaaccagaacaaatcgcggtaataaattcgactcattcaacgaacatcatggct
tgtccgggaagtgggaagactactgtattgattgctaagattgctttgctcttagataaa
attaaaaaagaaggctcgagaaaagggatctgtgtaattactcacacaaacgtcgccgtt
gaagagatagtcagtagtcttgaaaaattagggataagtaatattatgtaccctcacttc
gtaggcaccattcatgagttttttaatacttttttttctatgaaagcgtatggtttttat
acgaagaaagatgctttttatttactagataatgaagagtataagaaatatttcgaaaga
ttctttgagtataacaaaccagggtattggacttacccaactcccgttaatgctgttgat
aaaacagatatacacattgatgaaaataaccagctccatattatttccaagagagaaggt
aaggattatagcgctcctgttctaaatacgattcaggacatgttttgcaaaggatttata
aggcattccgatactgtggcgcttgctaattggtatatccgaaaccataaagcggctatt
caaaaagcatttcaaaatcgatttcaatacttctttatagatgaagcgcaggacaccagc
attgagcaatacgagaatctcagcatgttgatcgaaaataacaatgaaactattgtgcag
tggtttggggattcttatcaagcactctatagtctctatggtaaagatgatgcctggaag
ccagatctcgaagagagtctacaaattaattttagtaatcgctttggagaaaacatagcc
agaattcttagaaccacatgtatcgaggaatatagccgtttagaagcgaataacacgatc
agttcggccgttccgcacttttttatatataatgatgagaacaaagagcaattattgagt
gtttattctcgaattgtatctgattttaaggctgcttctctcgaaactgtccaaatcaag
ggaaagatagcggctgtctgtcatcatcatgattcgctcgaagggtattcaaaaacatat
caacgctcaaaaattagcaagccattactgtcagaaatgcaggcttgcctacatgaatgt
catcaatcattagtgtacgcattaagaaagaacgatcgaagagaagagaacggacgaagt
gagtacctgaagaatatctctcaattcttaagagataaatatccatcaaactatattgaa
ataaaagcgctttgggctaggtggataaaagctataagtgaagaaactgatgaatcaatg
atcttagttgacctagaggttaaatacagagaattgattacaactactttgaataaagac
aataatgacgatatcgacgttacaaaaattcatgatttgaggccccgcttagtaaagatt
cttcaaaagaatacccgaactgaacccactgaaacggcaactaacactattcctgtagga
ttggctgtcgaattaaacaccatacatggtgttaaaggtgagacccatttcgccactctt
ctattagaatcagtaagagatggggtctcagacatgcagaaaattatcagctttctcaca
ggtacataccagcctgaattggttgaagaatcgcttgtaaaagattcattaaaactggct
tatgttgctttaagccgaccgcgttattttgtaggcgtggcgatgcatgaagaaaatctt
tcgattcaaaatattcaagatatagaaaggttcggttggaggattgtagaagttaatgat
taccttgatatcacttga
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