Paenibacillus ihbetae: BBD41_19790
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Entry
BBD41_19790 CDS
T05154
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBD41_19790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_19790
Enzymes [BR:
pib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BBD41_19790
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBD41_19790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
AKAP28
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ANY74626
UniProt:
A0A1B2E3Q7
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Position
4457041..4458162
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AA seq
373 aa
AA seq
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MLKIGSHVSFSDKGLLTAATEAKSYGSSSFMIYTGAPQNTRRKPIESMFIEEGKLAMQEC
GIEEIVVHAPYIINLGSYKPNTYELAVSFLQEEIRRTHAVGVKNIVLHPGAYTDKDAEYG
IDRIAEGLNEVLGGTDETEVHIALETMAGKGTEMGRSFEEIASIIDKVKYNDRLAICLDT
CHIHDAGYDIVDDLDGVLEKFDQVIGLDRLTVVHINDSKNPRGAAKDRHTPIGTGWIGYD
AIHRIVHHEKLQGRPFILETPWIGKDPKTQRPMYEIEIALLRGDVEQRFGQAFIQQVEQL
HEFFAKEGIESRSFVLDTWNLLKNDAKAKKADPREPMERLYDMVMSAELFPELSEEQVNQ
RLIAYLSGASLTA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatcgggtcccatgtgtccttctcggacaaggggctgctgactgcagcgaca
gaggctaaatcttacggctccagctcgttcatgatatataccggcgctccgcaaaataca
cggcgcaagccgattgaatcgatgtttatcgaggaaggcaagctggccatgcaggaatgc
gggattgaggagattgtggtgcatgcgccttatattatcaatctcggctcgtacaagccg
aatacgtatgagcttgcggtgagcttccttcaagaggaaatccggcgtacccatgccgtc
ggcgtgaagaatatcgtgcttcacccaggggcatacactgataaggatgcggaatacggc
attgaccggatcgccgaaggcctgaatgaggttcttggcggtaccgatgagacggaagtg
catatcgctttggaaacgatggccggcaaaggcactgagatggggcgctccttcgaggag
attgcttccattatcgataaggtaaaatataacgaccggctggcgatctgcctggataca
tgccacattcacgatgcaggctatgatatcgtcgatgatctggacggtgtcctggagaag
tttgatcaagtgattggtctcgaccggttgacggtcgttcatattaacgacagtaaaaac
ccgcgcggcgcggccaaagaccgccatactccgatcggaacaggctggatcggatacgat
gcgattcaccggatcgtccatcatgagaagctccaaggccgtccgttcatccttgagacg
ccgtggatcgggaaagatccgaagacacagcgtcctatgtatgagatcgaaatcgcgctg
ctgcgcggtgatgtggagcaacgctttggacaagcgttcattcagcaggtcgaacagctg
catgaatttttcgcgaaggaaggcattgaatcccgttcgttcgtactggatacatggaat
ctgttgaaaaacgatgctaaggccaagaaagccgaccctcgcgagccgatggaacgctta
tacgatatggtgatgtccgccgagctgttccctgagctttcggaagagcaggtcaaccag
cggctgatcgcctacttgtccggtgcttcccttacggcttaa
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