Paenibacillus ihbetae: BBD41_24820
Help
Entry
BBD41_24820 CDS
T05154
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pib
Paenibacillus ihbetae
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pib03016
]
BBD41_24820
Enzymes [BR:
pib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBD41_24820
Transfer RNA biogenesis [BR:
pib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBD41_24820
Prokaryotic type
BBD41_24820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ANY75535
UniProt:
A0A1B2E6C6
LinkDB
All DBs
Position
5568523..5569437
Genome browser
AA seq
304 aa
AA seq
DB search
MTELEGILAVHKPAGWTSHDVVAKVRGIVRMKRIGHTGTLDPEVTGVLPLCLGRATRVVE
YMQELPKEYEAVLRLGYATDTEDVTGTVIEEADSVQVTREEAEQALNSFVGEISQVPPMY
SAVKINGKRLYELAREGKTVERKSRTVTIHEIEMTGFDASGAYPEISFRVLCSKGTYIRT
LCVDIGRKLGVPSVMVRLVRTISAGIPAADCLTLDTIEQLMKEGQLQNKLIPVDRAVSHL
PAHTVSDEKAEAALQGQRLSARAVEPRVESDEPIRLYDSQERFLGIYKRQAESGAIVPVK
VFSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacagaactggaaggtatcttggctgtgcataagcccgccggctggacatcgcatgat
gtggtagccaaagtaagggggattgtccgcatgaaacggattggccatacgggtacgctg
gatcccgaggttacgggagtgctgccgctgtgtttgggcagagcgacgcgagtcgtggag
tatatgcaggagctgccgaaggaatacgaggctgttctgcgacttggatatgctacggat
acggaggatgtcacaggtacggttattgaagaggcagacagcgtgcaggtgacgagggag
gaagcggagcaagcgctgaattcctttgtcggtgagatttcccaggttcccccaatgtat
tccgctgtcaagataaacggcaagcggctgtatgagcttgcgcgtgaagggaagaccgtg
gaacgcaaaagccggaccgttaccattcatgagattgagatgaccggctttgacgccagc
ggcgcctatcccgaaatatcgtttcgggtgctgtgctccaaaggtacatatatccgcaca
ttgtgcgtggatatcggccgcaagctcggcgttccttccgtcatggttcggcttgtacgc
acgatctcggccggcattccggcagccgattgcctgactcttgacaccatcgaacagctt
atgaaggaaggacagcttcagaataagctgattccggtcgaccgggcggtctcccatctt
cctgctcataccgtatcggatgagaaggctgaagctgctctgcaaggacagcgcttgtcc
gccagagccgtggaaccccgggtcgaaagcgacgagccgatcaggctctatgacagccaa
gaaagatttcttggaatctacaaacggcaggccgaatcaggggcgatcgtgccggtgaag
gtcttctcaagataa
DBGET
integrated database retrieval system
