Paenibacillus ihbetae: BBD41_25005
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Entry
BBD41_25005 CDS
T05154
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pib
Paenibacillus ihbetae
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pib03016
]
BBD41_25005
Enzymes [BR:
pib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BBD41_25005
Transfer RNA biogenesis [BR:
pib03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BBD41_25005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Dor1
Motif
Other DBs
NCBI-ProteinID:
ANY75569
UniProt:
A0A1B2E6I2
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All DBs
Position
5611192..5612751
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AA seq
519 aa
AA seq
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MSKESKDYSKYFDFSGAKILSEDEHGKRIRINGREINILSEPNHRQEKQRGKESVQVLYD
TALPEEFKQLGAGKHYIVYTYGCQMNEHDSETIKGLLEQMGYQPTEDRKEADIILLNTCA
IRENAEDKVFGELGHLKHLKTEKPDMLLGVCGCMSQEEAVVNRILQKHGFVDLIFGTHNI
HRLPHLIQEALFSKEMVVEVWSKEGDIVENLPKKREGLRGWVNIMYGCDKFCTYCIVPYT
RGKERSRRPEDVIAEVRELARQGYKEITLLGQNVNAYGKDFTDIQYRFGDLMDDIRKIDI
PRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSGSSQVLKRMSRKYTRESYLELVR
KIKQAIPDVVLTTDIIVGFPGETDEQFEETLSLVREVGYDSAFTFIYSPREGTPAAVMED
NVPMEVKSQRLQRLNEVINEFSRKSNDQLLGATVEVLVEGISKNNDSVLSGRTRSNKLVH
FEGSPDLIGSFVQVKVTDTKTWYIKGDLIADPVPASDAV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggaaagtaaggactactccaagtattttgatttttctggcgcaaagattctc
tcggaagacgagcatggcaagagaatccggattaacggccgggaaatcaatattctatcg
gagcctaatcatagacaggaaaaacagcgcggcaaagagagcgtgcaggtattgtacgat
acggcgctgccggaagagttcaagcagcttggcgcgggcaagcattacatcgtctatact
tacggctgccagatgaacgagcacgattcggagacgatcaagggactgcttgagcaaatg
ggctatcagccaacggaagaccgtaaagaggcggatatcattctgctcaacacctgcgca
atccgggagaacgcggaggataaggtgttcggcgagcttggccatttgaagcatctgaag
accgagaagccggatatgctgctcggcgtgtgcggctgcatgtcgcaggaagaagcggtc
gtgaaccgaattcttcagaagcatggcttcgtcgatctgatcttcggcacgcacaatatt
caccgtttgccgcatttgattcaagaagcgctgttcagcaaggaaatggtcgttgaggta
tggtcgaaggaaggcgatatcgtcgagaacctgccgaagaagcgggaaggactgcgcggc
tgggttaacattatgtacggctgtgacaagttctgtacatactgtattgttccgtatacg
cgcgggaaggagcgcagccgccgaccggaggacgtgatcgccgaagtgcgggagctcgcc
cgccaaggctataaggagataacgctgcttggtcagaatgtcaacgcctacggcaaggat
ttcaccgatatccaataccggttcggcgatctgatggacgatattcgcaagatcgatatc
ccccgcgtccggtttacgacgtcccacccgagagacttcgacgatcatctgatcgaggtg
ctcgccaagggcggcaacctggtggagcatatccatctgcctgtgcagtccggcagctcg
caggtgctgaagcggatgagccggaaatatacgcgcgagagctacctggagctcgttcgg
aagatcaaacaggctatccctgatgtcgttctgacgacggatatcatcgtaggcttcccg
ggagagacggatgagcagttcgaggaaaccttatcgcttgtacgcgaggttgggtatgac
tcggcatttaccttcatttactcgccgcgtgaaggcacgccggcagccgtcatggaagat
aacgttccgatggaggttaagagccaaaggctgcagcgcttaaatgaggttattaatgag
ttcagccgcaagagcaatgaccagctgcttggagccaccgtggaggtgctcgtggaagga
atcagcaaaaataacgattccgtgctgtccggacgcacgcggagcaacaagctggtccat
ttcgaaggttcccctgatctgatcggaagcttcgttcaagtgaaagtgaccgatacgaag
acctggtatattaaaggcgatctcatcgccgatccggtgccggcctcggatgctgtataa
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