Scheffersomyces stipitis: PICST_1171
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Entry
PICST_1171 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
pic
Scheffersomyces stipitis
Pathway
pic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PICST_1171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_1171
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PICST_1171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
4838103
NCBI-ProteinID:
XP_001383529
JGI:
1171
UniProt:
A3LS44
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Position
3:<1272892..>1275555
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AA seq
887 aa
AA seq
DB search
TKKRSSKKILDAFQIAERAENGSDSDNYNSGSDDDLTVQDGVLDASKFFKESRRPDGKFD
DEEIDSDEALGSDDDYDILNSKFSQTIRDKAKKRKTKEKKRRRGEQVSSDESEEEEDEDE
AGYASIDESQLVSLSEAWDMDDADLEKHSKSKSKSKSDSNKNELVFDEDAWETESSQESD
SDEEDEEDEGEDLEVESEEDIFRNESGEEEDDELDLSHTVSHLKSQMKKPEIQKKRLLTE
TREENEFVLPTGGNKLSLSEMMAAVDSSVSNEAFLIDKDAEKSKALATPLPKRIQERHER
KAAYEITKEEVSKWEDAVQSNRQAEVLKFPLNATVTHNDTASTFKTSTEPTTELEKRIHD
VLTESSLLDDKKEATFEEIAVAKMSAEEMKKRTNELRLMRELMFRDEKRAKRIKKIKSKQ
YHKIQKKERLRNQELVEGSDAESDGEDHDLKRARERMTLKHKTQSSWAKSMIKSGLSKDS
NNRAELEEMLRQGEKLRAKQLGYEDGDQSDEGVSDIERDYSNDDENADESIKKLGKGVLG
MDFMRNAEERSRQSNLKELEELRRLENEKDLDSFEDSNSALSSSKNQGRRVYAPSAASAN
AELNTVNQITIAEITEEESGNLTNKLSKKFDVVDSTKQKQKSKEIKEQDVNENEEEELNP
WLVTSANETSQKSQKITVVDKSSSKLAKAAAKIAKSKKRKQGKNYEDEDVIDMGESMKIV
DHHPGSESEDEDVNEVRMFKQKDLIKQAFAGDDVVQEFEIEKKRVVREEDDKEEDMTLPG
WGDWAGGNKKSKKRKVVRKVDGVVQKDKRKDKNLKNVIINEKVNKKNLKYQSSAVPFPFE
SREQYERSLRMPLGQEWTSRETHQRMTMPRIITKQGTVIDPLKAPFK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
accaaaaagcgtagttccaagaaaatcttggacgctttccagatagcagaacgagctgaa
aatggctccgacagcgacaactacaactctggaagcgacgatgatctcacagtacaagac
ggagttctagatgcttcgaaattcttcaaggagctgagaagacccgacggcaagttcgac
gatgaagaaattgactctgatgaagctttgggctcggacgatgactacgacattttgaac
tcgaagttttcgcagactataagagacaaagcaaaaaagagaaagacgaaggagaagaag
agaagaagaggagaacaagttagcagtgatgaaagtgaggaagaagaagatgaagatgaa
gctgggtatgccagtattgacgaatcacagttggtttcgttgtccgaagcttgggatatg
gacgatgctgatttggaaaaacatagtaagtctaagtctaagtcaaagtctgattccaat
aagaatgaattggtttttgatgaagatgcctgggagactgaatcatcacaagagtctgat
tctgatgaagaagacgaggaagatgaaggtgaagatttagaagtggaatctgaagaggat
atcttcagaaatgagtctggagaagaagaagacgacgaacttgatttatcacacactgtt
tcacacttaaaatctcagatgaagaagccagaaatacaaaaaaaacgattattgactgaa
accagagaagagaacgaatttgttttgcctacagggggtaacaagttatctttgagtgag
atgatggcagctgtagattccagtgtttccaatgaagcatttttaattgacaaggatgct
gaaaaatccaaagctttggccactccattgcccaagagaatacaggagagacacgagagg
aaagctgcttacgaaatcacaaaagaagaggttagtaaatgggaggatgcggtgcagtct
aacaggcaagcagaagtgttgaaattccccttgaatgccactgttacacataacgatact
gcaagtacattcaaaacatccactgagcccactactgagttggaaaagcgtattcatgat
gttttgacagaatcatcattgttggacgacaagaaggaagccactttcgaagagatagct
gttgccaaaatgtctgctgaagagatgaaaaaaagaaccaatgagttacgtttgatgaga
gaattgatgttcagagatgaaaagagagctaaaagaataaagaagatcaaatccaagcag
taccacaagatccagaagaaggaaagattgagaaatcaggaattagtggaaggttctgat
gctgagagcgatggtgaggaccacgacttgaagagagcaagagagagaatgactttaaaa
cacaaaacacagtcaagttgggccaagtcaatgatcaaatctggattatccaaagattct
aataacagagctgagttggaagaaatgttgagacagggcgaaaagttacgggccaaacaa
ttgggctatgaagatggagatcagagtgacgaaggagtctcagatatcgaaagggattat
tccaacgacgacgagaatgctgacgaaagtatcaagaagctcggaaagggtgttttggga
atggacttcatgagaaatgccgaagaaagaagtaggcagtccaacttaaaggagttggaa
gaattaagaagattggaaaatgaaaaggatttagattcattcgaagattcgaacagtgct
ctaagctctagcaagaaccaaggaagaagagtctatgctccatcggctgcaagtgccaat
gccgagctaaacactgtaaaccagattaccattgctgaaattactgaagaagaatctggc
aatttgacgaataaactcagcaagaagttcgatgtcgtggattcgactaagcaaaagcaa
aagtctaaagaaatcaaagaacaagatgtaaacgaaaatgaagaagaagaattaaatcct
tggttggttacttcggcaaatgaaacttctcagaagtcacagaaaattactgttgtagac
aaatcgtcttcgaagttggctaaggctgctgctaagattgccaaatccaaaaagagaaag
caaggcaaaaattatgaagacgaggatgtgattgatatgggcgaatcgatgaagattgtg
gatcatcatccaggcagtgagtctgaagatgaagacgttaacgaggttagaatgttcaaa
caaaaggatttgatcaaacaggcctttgctggtgatgacgtggttcaagaatttgaaata
gaaaagaaaagagtcgtcagagaagaagatgataaggaagaagatatgaccttacccggt
tggggtgactgggctggaggtaacaaaaagtccaagaagagaaaagttgttcgtaaggtt
gacggtgttgttcaaaaggacaagagaaaggataagaatttgaaaaacgtgatcatcaac
gaaaaggtcaacaagaagaacttgaagtaccagtcgtctgctgtcccattcccatttgag
tccagagaacaatacgaaagatcgttgagaatgccacttggacaagaatggacttccaga
gaaacccatcaaagaatgacgatgcctagaattatcaccaagcaaggtacagttatcgat
ccattgaaagccccatttaagtag
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