Scheffersomyces stipitis: PICST_27265
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Entry
PICST_27265 CDS
T01023
Name
(RefSeq) cleavage and polyadenylation specificity factor
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pic
Scheffersomyces stipitis
Pathway
pic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PICST_27265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_27265
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_27265
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PICST_27265
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PICST_27265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
4838380
NCBI-ProteinID:
XP_001384039
JGI:
27265
UniProt:
A3LT53
LinkDB
All DBs
Position
4:421636..422268
Genome browser
AA seq
192 aa
AA seq
DB search
MLHLNPILHPDTRNKRFKFEQFLRKEYNFGLDPDRPVCQFYVPQKGPSSCPNGSSCPNKH
VSSMYNNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGFCTQTPECLYLHID
PQSKIPACPSYEKGFCPDGPNCTKRHVRKILCPLYVSGFCPKGPECEFTHPKFDIVLGRM
RIKPDEEAKDEK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgctccatcttaatcccatattacatccagacacgcgcaacaagcggttcaagttcgag
cagttcttgagaaaggaatataattttggtcttgacccagacaggcctgtttgtcagttc
tacgttcctcagaaaggtccaagttcatgccctaacggaagcagctgtcccaacaaacat
gtgtcatctatgtacaataataagattgtgtgtaagcattggttgagaggactttgtaag
aagaatgatcattgtgagtttttgcatgaatacaacttgagaaagatgcctgaatgcttg
ttctactctaagaatggattttgtacgcagactccagaatgcctatatttgcacattgac
ccacagctgaagataccggcatgccccagctacgagaaaggattctgtcccgatggtccc
aactgtaccaaaagacatgtaagaaagatattgtgtccgctttatgtgtctggattctgt
cctaagggtccggaatgtgagttcacccatccaaagttcgatatcgtgttaggaagaatg
agaattaagccggatgaagaagccaaggatgagaaa
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