Scheffersomyces stipitis: PICST_28179
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Entry
PICST_28179 CDS
T01023
Symbol
VPS53
Name
(RefSeq) protein required for protein sorting at the late Golgi
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_28179 (VPS53)
Membrane trafficking [BR:
pic04131
]
Protein recycling
Others
EARP complex
PICST_28179 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
PICST_28179 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Sec6
Motif
Other DBs
NCBI-GeneID:
4850958
NCBI-ProteinID:
XP_001387747
JGI:
28179
UniProt:
A3GFA9
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All DBs
Position
1:complement(552342..554675)
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AA seq
777 aa
AA seq
DB search
MVTYEYDPVPDLRRIFISPNTLDELPQLLDYTNSYKQKLDEEIQQDISEYNSSRPNGLND
DICNLVDLIKGIKSDSDATRSSIVAMTGSIQNLDQYKKNLVLSMTILKRLQMLINANNTL
IQVMSSHNYQEILSLFSVIKELLGFFKPYKSIDEINQLNLMVVSTQNKLIDDIFIDFEDF
STQRLQDREDQLIYGCKILELIDLKYKDKLLNWFFNLQLKDIRSIFNNLDEAGSLDNLNR
RYIYFNNTLKSVQERYLEIFPKDWKVDLELSKIFCSMTKQDLINLLTSSNVKSNTLLDNL
TATLDLEKLLNDTFKTSEFTSIISSVFEPYLLIWINEQDKLLSSKFAEFMSISQLPSELN
EKDDFLTVLKVNNVPNIANSSTELFKNFQKILTSILKLSNGEILIELSKLFIKYLYDFHN
KILAPMVPKNDDELGGGIEPLKYLTMLLNTGDYVINNIDDLADKFKTLIKDQYEQRLPSY
ENVKDIYFKLINKSISNLLIKISNDLKFSWRQFLNINWSNLDTINDVSSYMLELKKQIIT
NLQVILPLIIRESYIRNFNDKLVELLITTLSNNLKFVKPLNMISLEQILLDITNLKDVCL
TFPLYSDPNYSESKNTTSSSPSYQKFVSNQFHSFESLLKVLMVPELPIENIIESYFELIG
DKSIRNFMKILNLKNIDKSAQSKYIENFKLQLTLDDGTLTNQNQLLSNLEDEEESGSVSI
SQVSTPTPDFKSPKLLPTKINNFEKNLREFAITGESHVNKLNENFKNFGKFFRKDND
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggtcacatacgagtacgacccggtgcccgatctccggcggattttcatatcgccgaat
acacttgacgagttgccgcaattgctagactacacgaattcatacaaacagaaacttgat
gaagaaatccaacaggatatctctgaatacaacagtagtcgtcccaacggtctcaatgac
gacatttgcaatctcgtagatctcattaaaggaatcaagctggactcagatgctactcgt
ctgtcaattgtagctatgaccggatcgatccagaacttggatcagtacaagaagaacttg
gtattgtcgatgacgattctcaaacgacttcaaatgcttataaatgccaacaatacgctc
atacaggtgatgtcttcacacaattaccaggagattctactgctttttagcgttattaag
gaattattgggctttttcaaaccatacaaatcgatagatgaaatcaatcagttgaaccta
atggttgtcagtacccaaaataagctcatagatgatatcttcatagattttgaggatttt
tcgacacagagactacaagaccgcgaggatcagttgatctacggctgtaagatcttagag
ttgattgacttgaagtacaaggacaagctcttgaactggtttttcaacttgcaactcaaa
gatataaggtccatcttcaacaacttggatgaggcaggctccttggacaacttgaaccgc
agatatatctacttcaacaacactttgaagagcgtccaggaaaggtatcttgaaatcttc
cccaaggactggaaggtcgacttggaattgagtaaaatcttttgctccatgaccaagcag
gatctcataaatttgctcacatcgtcaaatgtcaaatctaataccctcttggacaacttg
acagcaacattagatttagaaaaactcttgaacgataccttcaaaacgagcgagttcaca
ctgatcatatccctggtgtttgaaccttatttgttgatatggataaatgaacaggacaaa
cttctcagctccaaattcgcagaatttatgtcgatttcacaattgccatcagaattaaac
gagaaggacgacttcttaacggtattgaaggttaataatgttcctaacatcgcaaactct
tcaactgaattgttcaagaatttccaaaagattcttaccctgattttgaaactcagcaat
ggtgagattttgatagagttgagtaaattattcatcaagtacttgtatgatttccacaat
aagatattggcaccgatggttccaaaaaacgatgacgaattgggaggtggtatagagcct
ttgaagtacttgactatgttactcaatactggggattatgttataaataatattgacgat
ctagctgacaaattcaaaactttaatcaaggatcaatacgagcagaggttgccttcctac
gaaaacgtcaaagacatatactttaagttgatcaacaagtccatttccaatctcttgatc
aagatctccaatgatctcaagttcagctggagacaattcttgaatataaactggtccaat
ttagacacgattaatgatgtttccagctatatgttggaattgaagaagcagattatcacc
aatttacaggtgattctccctttgattataagagaaagttatataagaaatttcaacgat
aaacttgttgaattgcttataactacactcagcaacaacctcaagtttgtaaagcctttg
aatatgattagtttggagcagatccttcttgacattaccaatctcaaagacgtttgtttg
acattcccattgtattccgatcctaattattccgaatctaagaatacaactagtagctca
ccatcataccagaagtttgtcagcaaccagttccacagctttgaaagcttgttgaaggtc
ttgatggttcctgaacttccaatagagaatataatagagagttactttgaattgatagga
gacaagtctattcgcaacttcatgaagattctcaacttgaagaatatcgacaagtcggct
caatcaaagtatattgaaaatttcaaactacagctcactctagatgatggtaccttgaca
aaccaaaaccagttactatctaatttagaagacgaagaagagtcgggatcggttagtatt
tctcaggtcagcacacctaccccagactttaagtcaccaaaattgcttcctacgaaaatc
aacaactttgagaaaaatctccgagaatttgctatcactggagaaagccatgtcaataag
ttaaacgagaacttcaagaactttggtaagttcttcagaaaggataacgactag
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