Scheffersomyces stipitis: PICST_28317
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Entry
PICST_28317 CDS
T01023
Symbol
APN2
Name
(RefSeq) AP endonuclease
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_28317 (APN2)
Enzymes [BR:
pic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PICST_28317 (APN2)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PICST_28317 (APN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
BNR_assoc_N
Motif
Other DBs
NCBI-GeneID:
4851093
NCBI-ProteinID:
XP_001387814
JGI:
28317
UniProt:
A3GFP4
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Position
1:complement(910483..911931)
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AA seq
482 aa
AA seq
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MDLAQLQKLDPLDKIASKSSNLTIRYVTFNVNGVKTLFNYYPWTQFNQDYDLLFSSLQAD
IITLQELKLSSSNISSVKNIGHLPHYKSFISIPKVKRGYSGVGLFVRIPREEESSAVRRN
LQVIKAEEGITGYLSSGLSGDVCYRDLPESESIGGYPDDLDSVMGLELDSEGRCVCIELA
CNLVVFALYCPANSMGEDEGEAFRLNFLKNLLKRCYNLKYKHGKEVIVMGDINVSLDLID
SAEGIDDRQKQRLVLPKTDGIDFETINYDECFNFKRSTRARALLNQYTIQSLQHNLSLDR
HPDYEQQFLYDTTRYLQGRRMQMYTVWNTLNSSRAINFGSRIDLILASSYRMIKNISNAD
IWPFILGSDHCPVFTDFEALEIDKPEESKSAKLHFEAKYHHKLSQVRDISLLFSRKRTST
SENNSQNSSQNSASDETEVKRTKPEASSTKSAFKYVSRKPKKVDGTKPISTFFTLNSTKK
SL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacttggcccagctccagaagctagacccacttgacaagattgcactgaagctgctg
aatttgactattaggtatgtcacgttcaatgtaaacggagtcaaaacacttttcaactac
tatccttggacacaattcaaccaagattatgatcttctattcagttcactccaggctgac
ataattactcttcaggagctaaagttatcttcttccaatatttccagtgtgaaaaacatc
ggccacttgcctcattataaatcgtttatatctataccaaaggtgaagcgagggtacagt
ggagttggacttttcgtacgaattccaagagaagaagaatcgtcagcagtgcgacgtaac
ttacaagttattaaggctgaagagggcataacaggttatttatcctcaggactactgggc
gacgtctgctacagggatctacccgagctggaaagtattggaggatatcctgatgatttg
gattctgtcatgggtctagagctagacagtgaaggaagatgtgtttgcatagaactagct
tgcaacttggtggttttcgccttgtattgtcctgccaattctatgggggaagatgaagga
gaagctttccgacttaatttcttgaagaatctcttgaagcggtgctacaacttgaagtac
aaacatggcaaggaagttattgtcatgggagatataaacgtaagtttggacttgattgac
agtgctgagggtatcgatgatagacaaaaacagaggcttgttctacccaagacagatgga
atcgattttgaaaccataaactacgatgaatgttttaatttcaagagatcaacacgagct
cgtgccttattgaatcagtacaccattcaatctttacaacataacctctccttagaccga
catccagactacgagcaacagtttctatacgacactacgcgatatctacaaggaagacga
atgcagatgtatacagtgtggaataccttgaacagttcacgtgccattaattttggttcg
agaatcgaccttatcctagccagtagctacagaatgattaagaacatttccaatgccgat
atctggccatttattcttggttctgatcactgtcccgttttcactgacttcgaagcatta
gaaattgataaacctgaagaatcgaagtcagcaaaacttcattttgaagccaagtaccat
cataaactctcccaagtcagagatatatctctactattttcccgaaagagaacttctact
ctggaaaacaatagtcaaaattctagtcaaaattcagcttcagatgaaacagaagtgaaa
cgaacaaaaccagaagcttccagtacaaagctggccttcaagtatgttagtcgtaaacct
aagaaggttgatggaacgaagcctatcagtacattcttcactctcaactctacgaagaaa
agtttgtaa
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