Scheffersomyces stipitis: PICST_28360
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Entry
PICST_28360 CDS
T01023
Symbol
RAD10
Name
(RefSeq) ssDNA endonuclease and repair protein
KO
K10849
DNA excision repair protein ERCC-1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03420
Nucleotide excision repair
pic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PICST_28360 (RAD10)
03460 Fanconi anemia pathway
PICST_28360 (RAD10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_28360 (RAD10)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
PICST_28360 (RAD10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
Metaviral_G
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
4851137
NCBI-ProteinID:
XP_001387425
JGI:
28360
UniProt:
A3GFT8
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Position
1:1025005..1026225
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AA seq
406 aa
AA seq
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MNGSNDNGSADNAVDASSFASILAGVKRMRNQFGGDATEDSSNIQISQPEPDSEPAPKRV
QLGTSKDNIGTETSSPYIFSDKERQERSRDNPVINPRINRTTLHVATAEAIGPNLHANIA
PINVETSSSSLPVSSVRDSLPVRRVLAPSEILVNRSQIGNPLLKESLMRITPWRQDNDIL
SDYYISPMLQILFLSLKYHKLKPEYVWTRLKKLNGGSSSVNVNRNDKVLRVLLVVNDVDS
HQDLVRDLSGFCIRNDLSLVIASSFEEAGNYVVQAKKSYDAPVKSKGGIRGMRGLDYNSS
VLEAMTGIQRINKTDVSNLLANFKSVKEIILQGAHEDSESRLGMIGGLGAAKIRNLRRVF
SEPFIYNKQYEKLSEIEKNGEDQEDQKNLNHLQEIDFDSDNFDDSD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaagtaacgataatgggtctgctgataatgcagtggatgcctcttcgtttgcc
agtattcttgcaggtgtcaagcggatgagaaatcaatttggaggagatgcaacggaagat
tccctgaatattcagatttcacagccagaaccagattcagaaccagcgcccaagcgagtg
caactcggaacttccaaagacaatatcggtacagaaacttcatctccttatatttttctg
gacaaggaaagacaagaacgtagtcgagataaccctgtgataaatcctcgcataaatcgg
actacattgcatgttgctacagctgaagctatagggccaaatcttcacgcgaatatagca
cccataaatgtagaaacctcctcatcaagcttgccagtttcttcagtgagagattctttg
cctgtcaggagagttcttgcaccatctgagattcttgtgaatcgatctcagataggcaat
ccgcttctcaaggaatcgttgatgagaatcacaccctggcgacaggataacgatatacta
tcagactactatatcagtccaatgcttcagatccttttcctttcgctcaagtatcacaaa
ttaaagccagagtacgtatggacaagattgaagaagttaaatggaggctcatcgtctgta
aacgtaaatcgtaacgacaaggttcttagggtacttcttgtggtgaacgacgtagattcc
catcaagacttggtacgtgatctttctggattctgtatcaggaacgatctatcccttgta
attgcttcttcttttgaagaggctggcaattatgttgttcaagccaagaagtcgtatgac
gcacctgtgaagtcgaaaggtggaatcagaggtatgagaggtttggattacaattcgtcc
gtcttagaggccatgaccggcattcaaagaatcaataagacggacgtttctaacctattg
gccaacttcaagtcagtgaaagaaattatccttcagggtgctcatgaggactctgaaagt
agactaggcatgattggaggacttggtgctgcgaagatacgaaacttgcggagggtgttt
ctggaaccattcatctacaataagcaatatgagaagttgtctgaaatagagaaaaatgga
gaggatcaagaggatcaaaagaatttgaaccatctacaagaaattgattttgatagtgat
aactttgatgattctgactag
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