Scheffersomyces stipitis: PICST_28393
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Entry
PICST_28393 CDS
T01023
Symbol
SPT20
Name
(RefSeq) histone acetyltransferase SAGA complex member
KO
K11361
transcription factor SPT20
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_28393 (SPT20)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_28393 (SPT20)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PICST_28393 (SPT20)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PICST_28393 (SPT20)
SLIK complex
PICST_28393 (SPT20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
4851170
NCBI-ProteinID:
XP_001387440
JGI:
28393
UniProt:
A3GFX1
LinkDB
All DBs
Position
1:<1105477..>1107840
Genome browser
AA seq
787 aa
AA seq
DB search
MNNGTAVSPQRPPQHQLSPAQLQRQSQQALIQQQQQKQQQQTRPRPNIQNYHFATSSADI
LRKYAKYPASITLHIYETHYRFNNSSDSNIIPKNSPMIKDFLHHVMKEQIPVEMSELLKD
FSIKSYDGCLILQVFDHRNMVSTTAGVTKAGSSGESKDVKKEIIANGSADNAVANSSSGS
TSASAAGTNSTATASASTTAVSSGSSPATASGSGSSAGTAASTIPKPKTYRTLLRPTQLS
LYYDLLYHTDSALTKFTDSLSLQMESEILTLTNRKLDLAVPLNPYLCDEYLRPEPEYPKK
VWDEAIQDYKLIHSHREAADHKSRKIHSDEMVLHKTSEYEEIMLLLSNKYKRPDESQDKK
LIIVGPSASAAAAATTTTPANPPKSTSKEGTSGPDSKVKKGEDSAPSIPAVPAVTPAQST
TRSTGQFMRLRLIEEIRKKREAERASQEAKLQAQTQAVQSDGNLALSSVNQTPQDKRKLA
EMEIQRQQQLQQSSQQQLQQSPPSQQGQPQQKKLKKEPVKSQMPQQVQQFGNNNGNNNSS
NGGGIVTPQQNNIPVAPQPIRNGTALAAQQQQLQQQAQQQAQQQAQQQAQQQQQQQQQQQ
QQQQQRMVQNTSAPGSSQSSQQSSSQTSGSASSGSGSQPTLLQQQQQQIFQNSLTPEEQQ
VFRQLQQRMNTFAVMGNTGVAPNRQQLTPQQQQQAQQQAKAIQQQLMQKFPLYFQRLRQF
HLIQQQRQQKQKQIQEKQMQAAAAAAAQSNNNARFNQQQHPNISGKIVPGSSQSQADKKK
RNYKKKN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcacggcggtctcgccccagcggccaccgcagcaccagctcagtcctgcc
caactccagagacaactgcaacaggccctcatccagcaacagcagcaaaagcagcagcaa
caaaccagacccagacccaacatccagaactaccattttgccactctgtcagcagatatt
ctccggaagtatgcaaaatatcctgcttctattacacttcacatatacgaaacccactac
cgcttcaacaactcgctggattccaacataatacccaagaactcgccaatgatcaaggac
tttttgcaccatgtgatgaaggagcagattcccgtagaaatgagcgagttgctcaaagac
ttctccatcaagtcttacgatggctgcctaattcttcaggtgtttgatcatcgaaacatg
gtatcgactacagcaggggtgacaaaagctggttcaagtggagaatccaaagatgtgaaa
aaagagatcatagctaatggttcagcagataatgctgttgctaatagttcgagtggttct
acttcagcttcagctgcgggcacgaactccacagcaacagcatcggcttcaacaacagca
gtttcatcgggatcttctcctgctactgcatctggcagtggatcttccgctggaactgct
gcttcaaccatacctaagcctaaaacgtatagaactttacttcgtcctacgcagctttct
ctatactacgatttattgtatcataccgattcagcgttgaccaaattcaccgactcctta
tctcttcagatggagtcggagattctaactttgactaaccggaagttggatctcgctgta
cctttaaatccttatctatgtgacgagtatcttcgtcccgagcctgaataccccaagaaa
gtatgggatgaagcaattcaagactacaagcttattcatctgcatcgtgaagccgcggat
cataaatctaggaagatccatctggacgagatggtgcttcacaagacttctgaatatgaa
gaaattatgttacttttgtctaacaagtacaagagaccagatgagtctcaagataagaag
ttgataattgtaggtccttcggctctggcagcagcagccgctactaccactactccagct
aatccacctaaatcaacaagtaaggaaggtacttctggaccggattcgaaggttaaaaaa
ggtgaggattctgctccatctattccagcagttccggcagttactccagcgcaatctact
acgagaagtactggtcaattcatgagattgagactaatcgaagaaataagaaagaagagg
gaagcagaaagagctctgcaagaagccaaactacaggcccagactcaggctgttcagagt
gatggaaatctagcactcagttccgtcaaccagacaccacaggataagcgaaaattggca
gaaatggaaatacaacgtcaacagcaacttcagcagctgagccaacaacaattgcaacag
tctccaccttcacaacagggccagcctcaacagaagaaattgaagaaagaacctgtaaag
tctcaaatgcctcagcaagtacaacagtttggtaacaataatggtaataataatagtagc
aacggaggaggaattgtgactccacaacagaataacattcccgttgctccacaaccaata
aggaatggaacagccttagctgctcaacaacagcaattacagcagcaagcacagcagcaa
gcacaacaacaagcacaacagcaagcacagcaacagcaacaacagcagcaacagcaacaa
caacagcaacaacagcgtatggttcagaatacttcagctccaggaagtctgcaatcttct
caacaaagctctagccaaactagtggaagtgcttcttctggaagtggactgcagcccact
cttttgcaacagcaacagcagcagattttccagaactctttaactcctgaagagcaacag
gtgtttagacaattgcaacagagaatgaacacttttgccgtaatgggaaatactggggta
gcaccaaatagacaacaattgacaccacaacaacaacaacaagcccaacaacaagccaag
gcaatacagcagcagttgatgcagaaattccctctctacttccagcgtttgcgtcaattc
caccttatccaacaacagagacaacagaaacaaaaacagatccaagagaaacaaatgcaa
gcagctgctgcagcagctgctcagtcaaataataatgctcgttttaaccagcagcaacat
cctaacatttctggaaagattgtcccaggctcttctcagctgcaagcagacaagaagaag
aggaactataagaaaaagaattga
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