Scheffersomyces stipitis: PICST_28452
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Entry
PICST_28452 CDS
T01023
Symbol
DUR1
Name
(RefSeq) urea amidolyase
KO
K14541
urea carboxylase / allophanate hydrolase [EC:
6.3.4.6
3.5.1.54
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00220
Arginine biosynthesis
pic00791
Atrazine degradation
pic01100
Metabolic pathways
pic01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
PICST_28452 (DUR1)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
PICST_28452 (DUR1)
Enzymes [BR:
pic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.54 allophanate hydrolase
PICST_28452 (DUR1)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
PICST_28452 (DUR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
Amidase
CPSase_L_D2
AH_C
CT_C_D
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
NQRA_N
Biotin_lipoyl_2
ATP-grasp_5
RnfC_N
Exo70_N
GCV_H
HlyD_3
Motif
Other DBs
NCBI-GeneID:
4851230
NCBI-ProteinID:
XP_001387473
JGI:
28452
UniProt:
A3GG31
LinkDB
All DBs
Position
1:1261639..1267107
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AA seq
1822 aa
AA seq
DB search
MSYIGWSVQDWIQFHYQSTPNESFALLQELLGDQNKAPEDPAWISLATLDNLKHQWHFLQ
SKSNKLDLPLYGVPVAIKDNIDVKGFETTAACPSFAYSPEDDATTVKLLRNAGAIVIGKT
NLDQFATGLVGTRSPYGITPNTFNKDYVSGGSSAGSASVVARGIVPISLGTDTAGSGRVP
AALNNIIGLKPTKGVFSCAGVVPACKSLDCVSIFSLNLQDAQLVFNIMAQEDALNDEYSR
PLPANPLIKFPATPKIAVPTNLLWFDETENPKIYNKAVDHFKENVGAELVPLNIDLLLDL
AKCLYEGPWVSERFAATKDFFATNPPAADLDPTVTQIIKGGEKHSAATAFEYEYKRQGII
QKVSKLLEGIDAIIVPTAPLNPTIAEVTKEPIKVNANQGTYTNFVNLADMSALAIPAGFR
SDGLPFGITLLSHKFNDYALLDLASRYLKGVDSTEKRFYGCLKDKPVSSLGDELLPNIPG
FDPESQIKLAVVGAHLKGFQLHWQLEKVRANLIESTTTSGNYKLYALPKTGPVAKPGLRR
VTENGTKIALEVYAVPKETFGDFIAMVPEPLGIGSVELTSGEWVKSFICEEVGYNAPGTT
DVSSFGGWKNYHEHLAQEAKAQKKPFKSVLVANRGEIAVRIIKTLKRLNIKSIAVYSDPD
KYAKHVLIADAAVPLHGTSAAETYIAVEKIIQAAKDTGAEAIIPGYGFLSENADFSDRCG
KEGIVFVGPSGDAIRKLGLKHSAREIAEKAGVPLVPGSGLVKDALEAKEIAAKLEYPVMV
KSTAGGGGIGLQKVDSEKDIERVFETVQHQGKSYFGDAGVFLERFVEDARHVEVQMFGDG
KGRAIALGERDCSLQRRNQKVIEETPAPNLPEATRQKMRDAAESLGASMNYKCAGTVEFI
YDEKRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLYIAADDPPDFSQKIEVTGASMEA
RLYAENPVKDFMPSPGQLTEVKFPEWARVDGWVEKGTVISAEYDPTLAKIIVHGKDRNDA
LKKLRQALDETVVFGCITNIDYLRSIINSSMFAEAKVATKVLDSYDYRPTAFEIISPGAY
TTVQDYPGRKGYWHIGVPPSGCMDEYSFRVANRIVGNDKVAPGIEITLNGPKLLFHHDAV
IAVTGGAVEIDINGYKVEQWAPLHVKRGDKVSIGKLTTGCRAYLAIRGGIDVTEYLGSRS
TFALGNLGGYNGRVLKLGDVLFLGQPEISSCTLPAPISEPSNIAPSLIPNYDNKVWQVGV
TCGPHGSPDFFKPEAIETFFKDTWKVHYNSNRFGVRLIGPKPVWARPDGGDAGLHPSNTH
DYVYSLGAINFTGDEPVILTCDGPSLGGFVCAAVVVESEMWKIGQVKPGEQIQFIPISYE
TSIELKNQQDKIIENLTGDLPSFDGKAIKPENPVLFEFSASSNAPKVVYRQAGDRYILVE
YGENCMDLNTSYRIQRLIEMVEEHKTRGIVEMSQGVRSVLIEFNREVTQDELLKTLISYE
KEIFFINKWEVKSRIIKLPMAFEDKKTLDAVKRYSETIRSEAPWLPNNVDFIANINGITR
EEVRDLAYTARFMVLGLGDVFLGAPCAVPLDPRQRLLGTKYNPSRTYTPNGTVGIGGSYM
CIYTMESPGGYQLIGRTVPIWDKLTLASHSGDKPWLLRPFDQVEFYPVSEEEIDKFSEEM
NAGKFKVDIIETVFKHGKYLEWIQEHSDSIAEFQKNQGGEKLEEFNRLIQISNSELEKSG
TKIVEDESYDDTHELVYSEYSGRFWKSLVETGDEVKAGRALIVVEAMKTEMVVSAPRDGK
VVKIYHKNGDMVDAGDLVVVLA
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatataggctggtccgtccaggactggatccagttccattaccagtccactccc
aatgagtcgtttgcactcttacaagaattgctcggggaccagaacaaggctccagaagac
ccagcctggatctcgttggctacgctcgacaatttaaagcatcagtggcatttcttgcag
tccaagtccaacaagttggacttgcccttgtatggtgtgcctgtggccataaaagacaat
attgatgtcaagggttttgaaacgaccgccgcctgtccatctttcgcctattcgccagaa
gacgatgccaccacagtaaaattgttgagaaacgctggagccatcgtcattggtaaaaca
aacttggatcagtttgctaccggcttagttggaaccagatctccatacggaatcaccccc
aacaccttcaacaaagactacgtcagcggaggctcttctgctggctctgcatcagttgta
gccagaggtattgtaccaatttccttgggtacagacactgctggttctggaagagtccct
gcagctttgaacaatatcatagggttgaaaccaaccaagggtgttttttcctgtgctggt
gtcgttccagcctgtaagtcgttggactgtgtctccatcttttcactcaacttgcaagat
gcccagttggtattcaatatcatggcccaagaagatgccctcaacgatgaatactcgagg
ccattgcctgcaaacccattgatcaaattcccagctacacccaagatagccgttcccacc
aacttattgtggtttgacgaaaccgaaaaccccaagatttataacaaggctgttgatcac
ttcaaagaaaatgtcggtgctgaattggtaccattgaatattgatcttttattggacttg
gccaagtgtttgtacgaaggtccttgggtttctgagagattcgcagccacgaaagatttt
ttcgcaaccaaccctccagcagcagatttggaccctacagtgactcaaattatcaaggga
ggtgaaaagcattctgctgctactgccttcgaatatgaatacaaaagacaaggtatcatc
caaaaagtatccaaattgttggaaggcatcgatgctataatagtacctactgcacctctc
aatccaactattgcggaagtaacaaaagaaccaattaaagtcaacgccaaccaaggtact
tacaccaactttgtaaatttggctgatatgtctgcgttggctattccagcaggttttcgc
tccgacggtttaccatttggtattacgttgttgtcgcacaaatttaacgattacgcactt
ctcgacttggctagtcgttatttgaagggtgtagactcaacagagaagcgcttctacggc
tgtttgaaggataagccagtttccagcttgggagatgaattgcttcctaatattccaggt
ttcgacccagaactgcaaatcaaattagccgtagttggtgcccacttaaagggtttccaa
ttacactggcaattagaaaaagtcagagccaacttgattgagtctaccactacatcagga
aactataagctctacgccttgcccaagactggaccagttgcgaagccaggcttgaggaga
gtcactgaaaatggtaccaaaattgctcttgaagtgtatgccgttccaaaggaaactttc
ggagacttcattgccatggttccagagcctttgggaattggatctgtagagttgacatct
ggtgaatgggtgaagtctttcatttgcgaggaagttggatacaatgctccaggaacaacc
gatgtttcgtccttcggtggatggaagaattaccatgaacacttagctcaggaagcaaag
gctcaaaagaaaccattcaaatctgttttggttgccaacagaggtgagatcgccgtcaga
atcatcaagaccttgaaaagattgaatattaagtcgattgctgtatactctgacccagat
aagtatgccaagcatgtattgattgccgatgctgctgttccattgcatggaacttcggct
gctgaaacctatatcgcagtcgaaaagatcattcaggctgctaaggatactggtgccgaa
gccattattcctggttacgggttcttgtctgaaaatgctgatttctctgaccgctgtgga
aaagaaggaattgtctttgtaggtccatctggtgatgctatcagaaaattgggtttaaag
cactcagccagagaaattgccgaaaaggctggggttcctttggtacctggttccggttta
gttaaggatgctctcgaagccaaggaaatcgcagccaagttggaatatcctgtcatggtt
aaatcaacagctggtggtggaggtattggtttacaaaaagttgattcagaaaaagacatt
gagcgtgtttttgaaacagttcaacatcaaggtaaatcgtactttggcgatgctggtgtt
ttcttagagagattcgtagaagacgccagacatgttgaagtccagatgtttggagatggt
aagggaagggccattgctcttggcgaaagagattgttctttgcaacgtcgaaaccagaag
gttattgaagaaactcctgctccaaacttgccagaggctacaagacaaaagatgagagat
gcagccgaatccttgggtgccagtatgaattacaagtgtgccggtactgttgaatttatc
tacgacgaaaagcgtgatgaattctacttcttagaagtcaatgccagattacaagttgaa
catccaattactgaaatggtgacgggcttagacttagtggagtggatgttgtacattgct
gctgatgatcccccagatttctctcaaaaaatcgaagtcactggtgcttctatggaagcc
agattgtatgctgaaaacccagtgaaggatttcatgccttctccaggccaattaaccgaa
gtcaagttcccagaatgggccagagttgatggctgggttgaaaaaggtactgttatctct
gctgaatatgatcctactttggctaagatcattgttcacggaaaggacagaaatgatgct
ttgaagaagttgagacaagctttggatgaaacagttgttttcggctgtatcacaaacatt
gactacttaagatcgattatcaactcgtctatgttcgccgaggccaaggttgccaccaag
gtattggattcctacgattacagacctacggcttttgaaatcataagcccaggtgcttac
acaaccgtacaagactaccctggtagaaaaggctactggcacattggtgttcctccttct
ggttgtatggacgagtactccttcagagttgccaacagaattgttggtaacgataaggtt
gctcctggtattgagatcaccttgaatggtccaaagttattgtttcaccatgatgctgtt
atagcagttactggtggagctgttgaaattgatatcaatggatacaaggttgaacaatgg
gctcctctccatgtcaagagaggagacaaggtgtcaattgggaaattgactactggttgc
agagcttacttggctattagaggaggcattgacgtcactgaatacttaggctccagatct
acttttgcgttgggtaacttgggtggctataatggtagagttttgaaattgggtgacgtt
ttattcttgggtcaaccggaaatttctagttgtactttgccagctccgatttctgaacca
tctaacattgctccatcattgattcctaattacgacaacaaagtttggcaagttggtgtt
acatgtggacctcacggttctcctgatttcttcaaacctgaagcgattgaaactttcttc
aaggacacttggaaagttcattacaattctaatagatttggtgttagattgattggccca
aagcctgtttgggctagaccggatggtggtgatgcaggtttgcatccttccaacactcat
gactacgtttactctttaggtgctatcaacttcactggtgatgaacctgttatcttgact
tgtgacggtccatccttaggtgggttcgtctgtgctgccgttgttgtggaatctgaaatg
tggaaaatcggtcaagtaaagcctggtgaacaaattcaattcattccaatttcctacgaa
acttcgattgaattaaagaaccaacaggacaaaatcatcgaaaacttgactggtgacttg
ccttcttttgatggtaaggcaatcaagccggaaaatcctgtcttatttgaattcctggct
tcgtccaacgctccaaaggttgtttatcgtcaagcaggtgaccgatacattttggtagaa
tacggtgaaaactgtatggacttgaatacttcgtacagaattcagagattgattgaaatg
gttgaagaacacaagactagaggaattgttgaaatgtctcaaggtgttagatcagttttg
atcgagttcaaccgcgaggttacccaggatgaactcttgaagacgttgatttcttacgaa
aaagagatctttttcatcaacaagtgggaagttaagtcgagaatcattaaattgccaatg
gcctttgaagacaagaagactttggatgctgttaagagatactcagagaccattagaagt
gaggcaccatggttaccaaacaatgttgacttcatagctaacatcaacggcattactaga
gaagaggtcagagatttggcatatactgctagattcatggtgttgggtctcggtgatgtc
ttccttggtgcaccttgtgcagttccattggatccaagacaaagactcttgggtacgaag
tacaacccatctagaacatatactcctaacggaactgtgggtattggtggtagttatatg
tgtatctacaccatggaatcaccaggaggatatcaattgatcggcagaactgttcctatt
tgggataagttgaccttggcttctcattctggtgacaagccatggttgttgagaccattc
gatcaagttgaattctatccagttagcgaagaagaaatcgacaagttctctgaagaaatg
aatgctggtaagtttaaggtcgatattattgaaactgtcttcaaacacggcaagtacttg
gagtggatccaagaacattctgactcaattgctgaattccagaagaaccaagggggtgag
aagttagaagaattcaaccgcttgatccagatctcgaacagtgaattggaaaaatctggt
accaaaattgtagaagacgaatcctacgacgacacccacgaattggtttactcggaatac
tctggtagattctggaaatccttagttgagactggtgatgaagttaaagctggtcgtgca
ttaattgttgttgaagctatgaaaactgaaatggttgtctctgcaccaagagacggtaag
gttgtcaagatctaccataagaacggtgatatggtggatgctggagatttggttgttgtt
cttgcatga
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integrated database retrieval system