KEGG   Scheffersomyces stipitis: PICST_28599
Entry
PICST_28599       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K15079  structure-specific endonuclease subunit SLX4
Organism
pic  Scheffersomyces stipitis
Pathway
pic03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    PICST_28599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_28599
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     PICST_28599
SSDB
Motif
Pfam: Slx4 Polysacc_lyase_14
Other DBs
NCBI-GeneID: 4851367
NCBI-ProteinID: XP_001387544
JGI: 28599
UniProt: A3GGG8
LinkDB
Position
1:1620870..1623218
AA seq 782 aa
MVDSESQNDFANDGDNDSYFVSTQFESKQEEIMEKELQKLQTGQTVSQLLRFRSGISGLT
SVTPKPVKVSRPGLRKTGSRKSKKNQSMSAMVKERFKTDKYAYFSGDQRKIDEFLRRLEG
SEDIENMAMSTSGKDGSCLFTRDEWICIVQSIKLRFPELSTTKKKSLSAITRQINKQEKE
NEDENSIWSQARSLPSLELTDEDLKWLYDLDDEQMANRTITSSMTEVDGNDDHSPFVMTL
SQTTPSQLSHIKESDSLYSQETNVQTTEPADHQSGHMQRCHSQTAEGKTQSKILEIEIVS
DSEEEIESLIRNTEPDSSEDVYGANEVSSHQVPAVDALASFQSFPFAADMIPRNNVRDKE
HESLHISSSIRSSPAQSLTQSQVPSSIDSIIEPPCESPRKMSPIRDTQPEPVITSPFKTP
TKKSKELLSKYSSPVKNSIHNNMGSPVAMMVPRSSESAKHVEEIIVSSDEESVYSTAKSV
FPSAQIVISEVEDEDEEFYEIVSSIPEKHKPTAAAKKRKLLQTSRYEVVSNFNINDYDDD
QRGFKLRKLETKPIIIDSDNEIADSEEDEKNLSIIEITREVEAEESEHDTEYLINLGKQV
EGNSKMNTSVLQVPSSPSSITFGRTDILKELEAFSNSDLDTDRTINSNTSKNSNAIKSGT
NQTIDFTLLSTKELQERFKKWELKPVQGRQRMVSVLSEVSKLFTNSFNDPVPETRQGFEG
TVYGSLNRLVGSNQYWHEKIISFEPLRVSELRDWICTKGYELEEDFLMRYCDDNGYCCTR
QP
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggtcgacagcgagctgcaaaatgatttcgcgaatgacggggacaatgatagttacttt
gtatctacacaattcgagctgaagcaggaggaaatcatggagaaggagcttcagaagcta
caaactggtcagactgtatcacaattgcttcgttttagaagtggcatttctggtctaacg
agcgtcactccaaaaccagtcaaagtttctagacctggacttcgcaaaactggtagtaga
aaactgaaaaagaaccagtccatgagtgccatggtgaaagaacggttcaaaactgataag
tacgcatatttttccggagatcagcgtaagatagatgaatttctacgacgcctagaaggc
tcggaagacattgaaaatatggctatgtccactctgggaaaggacggatcgtgtttattc
accagagacgaatggatttgtattgtacaatcaataaagttacgctttcccgagttatcg
acgacgaaaaagaaatctctaagtgctataaccagacagataaataaacaagaaaaggaa
aatgaagatgagaatagtatatggtctcaggcgagatcgcttcctagtttggaattgaca
gacgaagacctcaagtggctctatgatctagatgacgagcagatggctaatagaacgatc
actagtagtatgactgaagttgacggcaatgatgaccatagcccatttgtcatgactctt
tctcagacaacgccttcacagctatcacatataaaagaaagcgattccttatactcacag
gaaacgaatgtacaaacaacagaacctgcggatcatcagtctggacatatgcaacgttgc
catagccaaactgcggaaggcaagacacagagcaaaatactagaaatcgaaatagtctct
gattcagaagaagaaatagaatctttgattcgtaacacagaaccagactcactggaagat
gtatatggagcaaatgaggtatcgtcacatcaagtcccagctgtggacgcgttggcgtca
ttccagagctttccatttgctgcagatatgattccgcgtaataatgtcagagataaggaa
cacgaatcacttcatatatcatccagtatacgctcctctcccgcccagtcgcttactcaa
agtcaggtgccttctctgattgactctataattgaacccccatgtgaaagccccaggaaa
atgtctcctatcagggatactcagccagaacctgtcattacatcgccattcaaaactcct
actaagaaatcaaaagagcttcttagcaaatacagttcacctgtcaaaaatagcatacac
aacaatatgggtagccctgtggcaatgatggtgcccaggtcttcagaactggccaagcat
gtcgaggaaatcattgtttcctccgatgaagaatctgtgtattcgactgctaaatcagtt
ttcccttcagcacaaatagtgattctggaagttgaagatgaagatgaggaattctacgag
attgtatcgtctattcccgaaaagcacaagcccacggcagcagcaaaaaagagaaaatta
ttgcagacttcgaggtacgaagtcgtgagcaatttcaacattaatgattacgatgacgac
cagcgtggtttcaagttgcggaaacttgaaacaaagcctataataatagattctgacaac
gagattgcagattctgaagaagacgaaaagaacctcagtataatagagataacccgggag
gtagaagctgaggagtcggaacacgatacagaatacctaattaacctcggaaaacaggta
gaaggaaatagtaagatgaatacttctgttttacaagttccttctagtccctcgtcgata
acgttcggaaggacagatatccttaaagagcttgaagcgttcagcaattctgacttggac
actgacagaactatcaacagcaatacttccaagaatagtaatgctatcaagagtggtaca
aatcaaacgatcgatttcaccttgttgtctaccaaggaattacaagaaaggttcaagaag
tgggaactaaagccagtacaaggacgtcaaagaatggtactggttctttctgaagtttct
aagttgtttactaactcgttcaatgatccagttccagaaaccaggcaaggatttgaaggc
acagtatatggatcgttgaaccgtctcgttggactgaatcagtattggcacgagaagatc
ataagcttcgaaccgttacgagttagcgaactacgagattggatctgcaccaaaggctac
gagttggaggaagattttctcatgaggtactgcgacgacaatggatattgctgtacacgc
caaccgtaa

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