Scheffersomyces stipitis: PICST_28643
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Entry
PICST_28643 CDS
T01023
Name
(RefSeq) ubiquitin-protein ligase
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_28643
Enzymes [BR:
pic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PICST_28643
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
PICST_28643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
Motif
Other DBs
NCBI-GeneID:
4851406
NCBI-ProteinID:
XP_001387561
JGI:
28643
UniProt:
A3GGK7
LinkDB
All DBs
Position
1:1732950..1738745
Genome browser
AA seq
1931 aa
AA seq
DB search
MATSSSTEELKRFLLHLPSDSNYVFSQDIRTQIRRACFLAISNNGQHLNRLFPNAFSNRN
DPNSESEALYSSQHMIDVVESEYNWLFANYYKISLKNRDPKHDTHNHHAFHANSPCARIF
RKGEPIYRCLTCGFDDTCALCSHCYQPEYHQGHKVHITICQRENGGVCDCGDPEAWVKEY
ICPYAAHDDESIIVRNEKMPVDLESSFLQTIETLLDYVIDVMSQSDQQFEDPVEATEAKV
ELNAINSTLDPSKYDCSTDNFTDANNERFFLMVYNDQIRHYRDAVQRIHLASRKVKQFAV
MVTEKVQNYGKAKVISSKNIKLLLERQKILSATGLSTCIRSHRDVFREDMCDEILIWIND
LTESEMFKMNNSAKNLFCRAFCEKWKSGLLVATHGDNSNHQYRVGALDACSKIPKLPSSN
TDRKTQLHWFFQPSKWNLPEDICRECDYNLTEEDYEPHTSHLGSRLQYLIYLDVRFWKSI
RIYLHDMYSTSLITNLWYKHIISCQYVDIYPTIADMFLTMDREPELNVMCTLSTQLFTCP
SNSTSIVQHGDVSRIFASIYGFLTIEEIRSPECVEVTQEISMKSLKNRIWGQIFFDIGYI
LSRSRDSKYILTSNIIPMACDILALFQGRPVMKREKKNHVEYESPDYTAFFHAISVIYQF
GEYIAHSLSNLGDIDPELRTSLSKNAIKYVISFLLKLENNDYPGLIDEYVDINLSIDKKI
SKEPIGGNIIQYYRIDEEKVSFLHPIHSFLSWLIELSDFKSPSEIVEVLNSSTDFYSITS
SVDIPNHLTSIFDYPIRTIVLMSQIKSGFWVRNGFSVRSQLQLYRNTGLRESGYMRDLFL
TQVFINSNSPNLVCFLLFSRWLLMDGWLIDSRTVRNEVTDLDLQVSADSSALCYDSKTLP
YMLEECMNFFIHVLTEDLYLRGLKDEVMIQTRIKKEIVHNLCFGPMSYTKLCSQIPDHIL
SEKRFDLILAEMTTFTAPNGATDIGVYHLKDEFYDQINPYYFNYTTNTKDDAIKFVKERI
HKTTRKPITEIVIDPKLRDPGELGIYRYIGNFSASAYFSDFLIRTLSYISKEGIEEVESL
LETALHLIHICAFENTIDISQYGTFYDRFVNISDAYGTSIAVLLYEILANDQFKNHHSKI
RCILKVFEDKYQNLGKILSDQIVDYNPLVIEFHTKMDNDENEFEKKRRMAKERQAKLMAK
FKKQQSSFLKKNNMERNYCSDIEMEDYEDEHGWRFPEPHCLLCQNAAEDAGPFGIITYIS
KSSEFRTIPFNDKFWVLKAFSDNASSDVNENAGDPVIEEVKSEKWHRFMGKIKESNVIGP
GFSHNDHVESKLVSSSCGHGMHFQCYMNYLNSNKSRSNQITRNSPENVERKEFLCPLCKA
INNMFIPILWTSNKRSLSQFLKPLSLPNPFDHIDPKIVHNQDWYKEFTFISDKDIEDMSI
LTKASTDIISSSSNNDFTGSQHSFRVLLSNMFQILSLLTFPQVFKADTVFVLSNTIKSIE
ISLRGTSARGESIIYQLSNNALINLRTLNEFRNTCVLMKIKSWIHTPNPKGDAYAKMLAN
IFSLSNGSINSSILEADFFESLVNILPLPSSGFSFNAILNTCFTGHLIQCLHILTREIAS
HDFYKSQDYSVLDIPVIADVDINKSKVALLAFHKLKLSEDFHGDDASIENDEKFGQVIYS
MLVKASTSFLRRAAIFAYVQCANVEKLDVSSVEDLRVEADRLCSFLNIKTIGEYLELFIL
PNKSYEGCVFQGFVDYARNLNKPGFENSETRKGLEYPGMIRLTELPERLDHFFTRYYYSD
KYNNPHMTIEDPAICLFCGAVVDAQKPAIGCKEGQCTTHYLKECAHDVGIFLLPKERSML
LLHKNGGTFYNAPFLDQHGELAGESKKAKTLHLMKARYDEFIKNVWLSHNIQNIIARNLE
RVLDAGGWDTL
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtcctcgagcaccgaggagctcaagcgattcttgcttcatctaccctctgac
tctaactatgtcttttctcaagatattcgtacccagatcagacgggcctgctttcttgcc
atctccaacaatgggcaacatctaaaccgcctctttcccaacgccttctcaaacagaaac
gatccaaatagcgaatcggaagcgttatattcactgcaacacatgatcgatgtcgtcgaa
tcagaatacaactggctctttgccaactactacaaaatctctctcaaaaatagagatccc
aaacacgacactcataaccaccacgccttccatgccaacctgccctgtgcccgtatcttc
cgcaagggtgaacccatttatcggtgtttaacttgcggtttcgacgatacctgtgctctc
tgctcccattgctatcaacccgaataccaccagggtcacaaggtccacatcaccatatgc
cagcgtgaaaatggaggcgtttgtgattgcggagatccagaagcttgggtcaaggagtat
atctgcccttatgcggctcatgatgatgaaagcattatcgtcagaaacgagaaaatgcct
gtagacttggaactgagctttctccagacgatagaaaccttgctagattacgttatcgac
gttatgagccagtccgaccagcagttcgaagatccggtagaagcaacggaagctaaagta
gaacttaatgcgatcaacagtactcttgacccactgaaatacgattgtagtacggataac
ttcaccgacgccaacaatgagcggttctttctcatggtatacaacgatcaaatcagacac
tatagagatgcagtccagcgtatccatttggccagtaggaaagtaaagcaatttgccgtc
atggtgactgaaaaagtgcagaactacggcaaagccaaggtgataagctccaagaatatc
aagttattactcgaaagacaaaagattttgagtgctacgggtctttcaacatgtataaga
tctcacagagacgtttttagggaagatatgtgtgatgagatcttgatctggatcaacgat
ttgaccgaaagtgagatgttcaagatgaacaactcagcaaaaaatcttttttgtagagct
ttttgtgaaaagtggaaaagcggtcttttagttgccactcatggagacaactcaaatcac
caatatagagttggagcgctagatgcctgttcaaaaatccccaaattgccgtcttctaat
actgatagaaagactcaactacattggttctttcaaccttcaaaatggaacttacctgaa
gacatttgcagagaatgcgattacaatttaacagaagaagactacgagccacatactagt
cacttgggatctcgtcttcagtatcttatttatttggatgttagattctggaagtctatc
agaatctatttgcatgatatgtactcgacttcattgatcacaaatttatggtataagcat
atcatttcctgtcaatatgtggacatataccctaccattgctgacatgttcttgactatg
gacagagaaccagagcttaatgttatgtgtacgttgtctactcagctcttcacgtgtcct
tctaactccacttcgattgttcagcatggtgatgtttcgcgaatttttgcgtccatatac
ggtttcttaactattgaggaaatcaggtcacctgagtgtgttgaagtaactcaagagata
tcgatgaaaagtttgaagaacaggatatggggccagatcttctttgatattggttacata
ttgagtagatctcgcgattcaaagtatattttgactagcaatatcatccccatggcatgc
gacatattggcattatttcaaggtcgtccggtgatgaaaagagaaaagaagaaccatgtg
gaatacgaaagtcccgattacactgcatttttccatgccatactggtcatctatcagttt
ggagaatacatagcccattctttgtccaatttaggagatattgaccctgaattgaggaca
tcccttagtaagaatgctattaaatatgtcatcagcttcttgcttaagttagaaaacaat
gactaccctggtcttattgatgaatacgttgacattaacctatcaatcgacaaaaaaatc
tcaaaggaacccataggtggaaatatcatccagtattatagaattgacgaggaaaaagtc
agtttcttgcatccaattcattctttcttgagttggttgatagaactctctgatttcaag
tctccttcggaaattgttgaagtgcttaactcatcgactgatttctacagcataacctct
agtgttgatattcctaaccatttgacttctatctttgactatcccattagaacaatagta
cttatgtcacaaattaagtctggtttctgggtgagaaacgggttcagtgtcagatctcaa
ttacagctttatagaaacacaggattgcgtgaaagtgggtatatgagagatcttttccta
acacaagtattcatcaactcaaatagtcctaaccttgtttgcttcctacttttcagtcgc
tggttattaatggacggatggttgattgacagcagaacggtaagaaatgaagtcactgat
ctagatttgcaagtttcagcggatctgtcggcattgtgctacgacctgaagaccttacca
tacatgttagaggaatgcatgaacttcttcattcatgtcttgactgaagatctttatttg
cgtggtctcaaagatgaggttatgatccaaacaagaatcaagaaagagattgttcacaat
ttgtgcttcggaccaatgagttacacgaagttgtgctctcaaattccggatcatatcttg
tcagagaagagatttgatctaatattggctgaaatgacaacatttacagccccaaatggt
gcaactgacattggtgtttatcatctcaaagatgagttttatgatcagataaacccatat
tatttcaactataccacaaatacaaaggatgatgcaattaaattcgtgaaggaaagaatt
cataagaccacaagaaaaccaattactgaaattgttatcgatcctaagttgagggaccct
ggcgaattgggaatttacagatatattggaaacttttcagcctctgcttatttttccgat
ttcttaattaggactttgtcgtacataagcaaggagggaattgaagaggttgaaagtttg
ctagaaactgcattacacttgatacacatctgcgcctttgaaaatacaatcgacatcagt
caatacggcacattctatgacagatttgtcaatatatcagatgcatacggaacatcgatt
gcagtgttactatacgaaattttagcaaatgaccagttcaaaaatcaccattcaaaaatt
cgttgtattttgaaggtctttgaggacaagtaccagaatttgggcaagatcttgagtgat
caaattgtagattataatccgttggtgattgagtttcacacaaagatggataatgatgaa
aacgaattcgagaagaaaagacgtatggcgaaagaaagacaagcaaaattaatggcaaaa
tttaagaagcaacagtccctgttcctcaagaagaacaacatggaaaggaattactgcagt
gatattgaaatggaagactacgaagatgaacatggttggagatttccagaaccccattgt
ttgctttgtcagaatgcggcagaagacgctggcccatttggtatcattacttacatctcc
aaatcatctgagtttcgcaccatccctttcaatgacaaattttgggttttgaaggcattt
tctgataatgctagttcagatgtgaacgaaaatgcaggagacccagtaattgaagaagtc
aaaagtgaaaagtggcataggtttatgggcaaaatcaaggagagcaatgttattggccca
ggattctcgcacaatgatcatgttgaaagcaagttggtttcgctgagctgtgggcatgga
atgcactttcaatgctacatgaactatttgaatagcaacaagagtcgcctgaatcaaatc
actagaaattcaccggaaaacgttgaaagaaaggaatttctttgtcctttatgtaaggcc
ataaataacatgttcattccaatattatggacctccaacaagagactgttgtctcaattt
ttgaaacctttgctgttgccaaatccgttcgatcacattgatccaaaaattgttcataat
caggattggtataaagaatttacattcatatccgataaggacattgaagacatgtccatt
ttgactaaagcatccacggatataatttctctgtcatccaacaacgacttcaccggatct
cagcacagcttcagggttcttttgagcaatatgttccagattttgtcacttcttacattc
cctcaagtttttaaggctgacacagtgtttgttcttctgaacacgattaagtcaattgaa
atatcattgaggggaacatccgcaaggggtgagctgatcatatatcaattgtccaataac
gctttgatcaacttgagaacattaaatgaattccgtaatacatgcgttctaatgaagatc
aagagctggattcatactcccaatccaaaaggagacgcctatgccaagatgttggccaat
atcttctcgttatcaaatggctctattaattcatccattcttgaggccgacttcttcgaa
tcgttagtgaacattcttcctttgccgtcttctggtttttcatttaacgccatattaaac
acatgtttcactggtcaccttatccagtgtctccatatattgactagagaaattgcctct
catgatttctataaaagtcaggattattcagttttggatattcctgtaatagccgatgtt
gatattaacaagtctaaagttgctttgttagctttccataagttgaaattgtctgaggat
ttccatggagatgacgcatccattgaaaatgacgaaaaatttggacaggtgatatactca
atgttagtcaaggcaagtacatcattcttgagaagggcagctatttttgcatacgttcaa
tgtgccaacgtagaaaaacttgatgtttcctccgtagaagatctaagagttgaagctgat
agactctgttctttcttgaatatcaagacaatcggcgagtatctagaattgtttattttg
ccaaataagtcatacgaaggttgtgtctttcaagggtttgttgattatgcaaggaatttg
aacaaacctggatttgaaaactcagagacaagaaagggattagaatatcccggaatgatt
agattgacagaacttccagaaagattggaccactttttcacaagatattactatctggat
aagtacaacaatccacacatgacaattgaagatcctgccatttgtctcttctgtggtgcc
gttgtcgatgctcaaaagccagccattggttgcaaggagggccagtgtacgacacactac
ttaaaagaatgtgcacatgacgttggaatcttcctattgcccaaagagcgaagcatgttg
ttgttgcacaagaatggaggcactttctacaatgctcctttcttggaccaacatggagag
ttagcaggagagtcaaaaaaggcaaagacactccacttgatgaaagcaagatatgacgag
tttattaagaacgtttggttgctgcacaatatccaaaacattatcgccagaaacttagaa
cgtgttcttgacgctggaggctgggatactctatag
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