Scheffersomyces stipitis: PICST_28646
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Entry
PICST_28646 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14574
ribosome maturation protein SDO1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PICST_28646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_28646
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
PICST_28646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
PrlF_antitoxin
SUV3_C
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
4851409
NCBI-ProteinID:
XP_001387563
JGI:
28646
UniProt:
A3GGL0
LinkDB
All DBs
Position
1:<1748165..>1748929
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AA seq
254 aa
AA seq
DB search
MAVINQPMSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDIDEVLQIPQVFQN
VSKGQVANNDDLMKAFGTTSQDEIILEILNKGEIQLHEKERSANLQQKQNEFLTIISTKC
INPKSKKRYPPSMIQKALNEVKFHLNPSKPTKQQALDAIRLLVEKQIIPIARAQMKVKIT
LSKKAYQKVYKDEIEPSIDSIIDEDKDGKVYECVCIIDPINYRKIVDVLEGDGAKISKSD
GSIEVIDMAAIKET
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgattaaccaacctatgagtcagattagattgaccaacgtgtcacttgtccgc
atgaaaaagggcaaaaagagatttgagattgcctgctaccagaataaagtccaggactgg
agactgaaagtggaaaaggatatcgacgaagtgcttcagattccccaagttttccagaat
gtttccaagggccaggttgccaataacgacgacttgatgaaggcttttggaactaccagc
caagacgaaataattcttgaaattctcaacaagggcgaaattcaacttcacgagaaagaa
agatcagctaacttacaacagaaacaaaatgaatttttaaccatcatatccaccaagtgt
attaaccctaaatcgaagaagagatatcctccttcaatgatccagaaggcattgaacgaa
gtcaaattccatttgaacccatccaaacctacaaagcaacaggcgttggatgctatcaga
ctacttgtagaaaagcagattattcctattgccagagcccagatgaaggtcaaaatcacc
ttgtctaagaaagcgtaccagaaagtctacaaagatgaaattgaacctagcattgatctg
attatagacgaagataaagacggtaaggtgtacgagtgtgtctgtattatcgatcctatt
aactatagaaagattgtagatgtgttggagggtgatggagccaagatctccaagagtgat
ggttccattgaagtgatagacatggccgctatcaaggagacttag
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