Scheffersomyces stipitis: PICST_29855
Help
Entry
PICST_29855 CDS
T01023
Symbol
TFB2
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B p52 subunit) (RNA polymerase II transcription factor B 52 kDa subunit)
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
pic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_29855 (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
PICST_29855 (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_29855 (TFB2)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_29855 (TFB2)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PICST_29855 (TFB2)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PICST_29855 (TFB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
4837416
NCBI-ProteinID:
XP_001382481
JGI:
29855
UniProt:
A3LP82
LinkDB
All DBs
Position
2:1350895..1352442
Genome browser
AA seq
515 aa
AA seq
DB search
MSSSNLFKATVNEYLEGLPQPVQSKLYEAPATCLAIFRLLTPMAKFYIMTMLFNDRPVAL
RDLDRWCKPHAKKLQFDSLKRLTSLHLIEEDRGGNHIRLNPTFRQNFRNCLTGSQQSNAF
GNLCTTTDKHRVDISFLDNFASSKWETILHFMVGTEATATPTTSVLSLLKSGGLMEGPGN
SPQNLKITNTGFQFLLQDVNAQIWTLLLQYLNLTQELHMDPVDVLNFIFVLGSLELGKSY
LVSSLSATQVSMLADLRDYGLVYQRTDSSGRFYPTRLATTLTSDSAALKTPSMAIEQALG
ASDGGEEQQIDTPTGNQGTVIIETNFKLYAYTNSPLEIAILNLFVHLKSRFTNMVCGQIT
RESIRSALYNGITADQIIKFLETHAHPQMKLLAKEKLDKKIEFDTSHNINTAGGAPQSKV
SGEGNVAQHKLEILPPTVVDQIKLWQLELDRIQTFDGYLFKDFSNQQEFDTLSNYASEVG
VLVWSDKIKKKFFVTAEGMTQVAEFANRKFQRNRQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagcaatctattcaaggctacggtcaatgagtacctcgagggccttccacag
cccgtacaatctaagttgtacgaggcccctgcgacttgtctagccatttttagattgtta
acacccatggccaagttctatataatgacgatgttattcaacgatcgaccggtagcactt
cgagatttggacagatggtgcaagccacatgcaaaaaagttacagtttgactctcttaaa
cggttgacatcattgcatttgatagaagaagacagaggagggaatcatatacggcttaat
cctacctttcgccagaactttcgcaactgcttgaccggttctcagcaactgaatgcgttt
ggtaatctttgtacaaccacagataagcatagagtagatatctcgttcttagataatttt
gcatcctccaaatgggaaactattcttcatttcatggtgggcactgaggccaccgctaca
cctacaacgtcagtactttcattattgaagctgggaggcttgatggaaggacccggtaat
agtccccaaaacctcaaaatcaccaacactggtttccagttccttttgcaggacgtcaac
gctcagatttggacgttgttgctccagtatttgaacttgacccaggaattgcatatggac
cctgtagatgtattgaactttatctttgtgttgggttcactagaacttggtaagagttac
ttggtatccagtttgagtgctacgcaggtgagtatgttggcggatttgcgcgattatggg
cttgtttaccaacgaacagactcttctggtagattctatcccaccagacttgctacaacg
ttgacatcagattcagcagccttgaaaacaccttctatggctatagaacaagcacttgga
gcttcagatggaggtgaagaacaacagattgacactccaacgggtaaccagggtactgta
atcatcgagacaaacttcaagttgtacgcatacaccaactctccgcttgagatagctatt
ctcaacctctttgtccatctaaagtctagattcaccaatatggtgtgtgggcaaatcaca
agagagtctattcgtagtgccttgtacaacggcattaccgcagatcagatcatcaagttc
ttggaaactcacgcgcatccccagatgaagttgttggcaaaggagaaattggacaagaag
attgaattcgatacaagccataatatcaacactgctggaggtgctccacaatcaaaagtg
tcaggtgaaggcaatgtagctcagcataagttagaaattcttcctccaacagtagtagat
caaataaagctctggcaattggaattagatagaatccaaacatttgatgggtatcttttc
aaagacttctctaaccaacaggagttcgacaccttgtccaattatgcatcagaggtcggc
gttcttgtttggagtgacaaaatcaaaaagaaattctttgttacagcagaagggatgacg
caggtggccgagtttgccaataggaagttccaaagaaacagacagtaa
DBGET
integrated database retrieval system
