Scheffersomyces stipitis: PICST_30161
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Entry
PICST_30161 CDS
T01023
Name
(RefSeq) predicted protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PICST_30161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_30161
Enzymes [BR:
pic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PICST_30161
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PICST_30161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
4837264
NCBI-ProteinID:
XP_001382630
JGI:
30161
UniProt:
A3LQ27
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All DBs
Position
2:2104136..2105467
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AA seq
379 aa
AA seq
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MPPKVKTEVAKAVKETVKKTVRAKKVKKVEFKYERSTTSKFKFGAHVGASGGVSNSVINA
RNLGANSFALFLKSPRKWVSPPISAEEIDKFKSLCEEHGYDPRTDVLPHGSYFINLANPD
PEKEEKAFDGFLDDLHRCEQLNIGLYNFHPGSSLDGDHREALERLAKNINRAIKETSFVK
IVIENMAGHGNLIGSNLQDIRDVIDIVEDKSRVGVCVDTCHTFAAGYDISTEEKFEAFWK
EFDNIVGAEFLSAIHLNDSKAPLGANRDLHQFLGQGFLGLEAFRVVANSPRLHNIPIILE
TPVGNDDSYYGEEIKLLELLEDKTIDDTEFVEKKEKLSKLGAKERSEHEKKFETKKAKTA
KKTAGDDIASLVTKRPKRK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaagttaaaactgaggtagccaaagctgtcaaggaaactgtcaaaaagacg
gtcagagccaaaaaggttaagaaggtcgagttcaagtatgaaagactgactacgagcaaa
ttcaaatttggagctcacgtaggtgcatctggtggagtttcaaattccgtcatcaatgcc
agaaaccttggtgctaacagttttgccttgtttttgaagtctcctaggaaatgggtgagt
ccccccatctctgctgaagaaattgacaaattcaagctgttgtgcgaagaacacggatat
gatcccagaaccgacgttttacctcatggatcgtatttcattaacttagccaatccagac
cctgaaaaggaggaaaaagcgtttgacggatttctagatgatttgcacagatgtgaacaa
ttgaacattggattatataactttcatccaggctcgagtttagacggggaccatagggaa
gctcttgagaggttggccaaaaacatcaacagggctattaaagaaacaagctttgtcaaa
atcgtgattgaaaatatggctggccacggtaacttgatcggatccaatctacaagatatc
agagacgtcatagacatcgtagaggacaagctgagagtcggagtttgcgtcgacacttgc
cacacatttgctgctgggtacgatatttcgactgaggagaagtttgaagcgttctggaag
gagtttgacaacattgtgggtgccgaattcttgagtgccatccatttgaatgactccaaa
gctcctttgggtgccaacagagatttacaccaattcttgggacaaggatttttgggcttg
gaagcattcagagtcgtggctaactcgcccagattgcacaatattcccatcatcttggaa
acccccgtaggtaacgacgatagttactatggagaagagattaaactcttggaactatta
gaggataaaaccattgacgacacggagtttgtagagaagaaagaaaagctctcgaagttg
ggagcaaaagagagatccgagcatgagaagaagttcgagaccaagaaggctaagacggct
aagaagactgctggtgatgatatcgcttcgttggttacaaagagacccaaaaggaagtag
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