Scheffersomyces stipitis: PICST_30256
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Entry
PICST_30256 CDS
T01023
Symbol
DIP2
Name
(RefSeq) beta transducin
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
pic
Scheffersomyces stipitis
Pathway
pic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PICST_30256 (DIP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_30256 (DIP2)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PICST_30256 (DIP2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Utp12
ANAPC4_WD40
Beta-prop_VPS8
DSE1_N
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_SPT8
CFAP251_N
Beta-prop_Nup120_160
Beta-prop_Aladin
Beta-prop_Vps41
WD_LRWD1
RMC1_N
Beta-prop_EIPR1
WDR54
PROPPIN
Beta-prop_ACSF4
WD40_like
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
4837349
NCBI-ProteinID:
XP_001382680
JGI:
30256
UniProt:
A3LQB6
LinkDB
All DBs
Position
2:<2374693..>2377626
Genome browser
AA seq
977 aa
AA seq
DB search
MVKSYDRYDQEKCFGVITSQSNILWLPPSDSQSAKSNGRAISSALEEILVWDIKTGEILQ
RLRDGLTPGASNAPTSHPPSPVTYLAHHSDTNILAAGHLDGSIKLWDLTSGSVIINFSGH
KSAISLLKFDRSGTRLCSGSSDSTIILWDLVGEEGLFKLKGHKSQITGVAFLSENESEEV
SDEMEDYLLSVSKDGLIKLWELKSQQCIETHLAHSNECWSLGINKSKNLAITSGNKDQVK
VWAIDLTQPDTQKIVEKGLFEKQSKARCNEISFKYIKSSTSIVELFSLQNADRTIEIFRV
RSSDEIKKGIARRTKRLREKGYEDNEILQSIQEAEVAMTISPFTTLRTVSKIKSCTWVAK
SSKKLDILISLTNNSIEYHNIPVPESFKKASASDIYSVKQHSIDLLGHRTDIRAMDISSD
SKLLATASNGELKIWNIKTTNVIRSFALEGGYALCCKFLPGGTLVVVGYKNGDLELYDLA
SSSLVDKVEKAHDSGNSMIANGNKEDENGSAIWSLDLTPDGKTLVTGGNDKSVKFWNFNV
EQEVIPGTNTTISNLKLVHTQTLELNEDVLCVKISPDAKYLAISLLNNNVQVVFFDSLKL
FLTLYGHKLPVLSIDISFDSKLIITSSADKNIKIWGLDFGDCHRSIFGHQDSIMNVRFIG
ETHHFFSSGKDGLIKYWDGDKFECIQKLAAHQSEVWCLSVSNDGLFMVTASHDHSIRLWS
ATDDQVFLEEEREKEMDELYENTLLDSLEDDEAPVRENEEDDEEMDEVTKVSRQTMETLK
AGEKLMEAMDIGIEDVEADEEYQLLLKNYIKTSGAVLPVKPTSNSILLAYNMSGQEYVLS
VISKIRSAQLDDALLVLPFSYSLRLLKFIEIWTSKEHVKTNVVNMSLICKILFFVIQSNA
KELISQKDPQIKNQMLKVKEQLRDELSQTCKQLGVNTQGLRFAKQQWKLTHETEFIDEAE
QREYEDKKAAKRTFATI
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtcttacgatcgttatgaccaagagaagtgctttggagttataacttcacag
tctaatatcttgtggcttccaccttcggactctcaatctgccaaatctaatggtcgtgcc
atctcatcagctcttgaagagatcttggtttgggatatcaagacaggggaaattcttcaa
aggttaagagatggattgactcctggggcttctaatgcccctacttctcatcctccatca
cctgtaacatacttagcccaccatagtgatacgaacatcctagcagctggccatcttgat
ggatcgatcaagttatgggatctcacttcgggcctggttatcattaacttcctgggacat
aaatcagctataagtcttttgaaatttgacagaagtggtaccagattgtgttctggatcc
tcagactctaccataattttgtgggatcttgtaggagaagaaggtttgttcaaattgaag
ggtcataagagccaaatcaccggcgtagcatttctttccgagaatgaactggaggaagtc
agtgatgaaatggaagactatttgttatctgtttccaaggatgggttgatcaaattgtgg
gagttgaagagtcagcaatgtatcgagacccacttagctcatagtaacgaatgttggtct
ctcggcataaataagtccaagaacttggccatcacttccggcaataaggatcaagtcaaa
gtgtgggctattgacctcactcaaccagacacacagaaaattgtagaaaaaggtttattt
gaaaagcaaagcaaagccagatgtaatgaaattctgttcaagtacatcaagagttcaact
tctattgtagagttgttctctctccagaacgctgatagaactatagaaatcttccgagtc
agatcgtctgacgaaattaagaagggtattgcaagaagaacaaaaagacttcgcgaaaag
ggctacgaagacaatgagatcttgcaatcgatacaggaagcagaagttgccatgaccatc
tctccattcaccacattaagaaccgtctctaagatcaagtcttgtacttgggtagccaag
tcgagcaagaagcttgatatcttgatttcattaaccaataacagcatagaatatcataac
atcccagttccagaactgttcaaaaaagcgtccgcttctgacatatattctgtcaaacag
cactcgatcgacttactaggtcataggactgacatcagagccatggacatctcatccgat
tccaagttgttagccactgcatctaacggtgaattgaagatctggaatatcaagactact
aacgtcattagatcgtttgcattggaagggggttacgcattatgttgtaagttcttacct
ggtggcacattggttgtcgtaggctacaagaatggtgatttggagttgtacgatcttgca
tcatcttctttggtagataaagtcgagaaggctcatgattcaggcaactccatgatagca
aatggtaacaaagaagacgaaaatgggtctgctatttggtctttggatttgactccagat
ggaaagactttagttactggtggtaacgataaatctgttaaattttggaacttcaacgtt
gaacaagaggtaatcccaggcacaaatacgacaatttcgaacttgaaattagtccacaca
caaaccttagaacttaatgaggacgttttgtgtgtcaaaatttctcctgatgccaagtac
ttggcaatttcgttattgaacaacaatgtccaggttgttttctttgacagcttgaagttg
ttccttacattatacggtcacaaattgccagttttgtcgatcgatatctccttcgattct
aaattgatcatcacttcttcagctgacaagaacatcaagatctggggtttggactttggg
gattgtcatcgttctatttttggtcaccaagattcgatcatgaatgtcagatttattggt
gaaactcaccatttcttctcttcaggcaaagatgggttaattaagtattgggatggtgat
aagtttgagtgtatccagaagcttgctgcccaccaatctgaagtatggtgcttgagtgtc
agtaatgatggcttgttcatggtcactgcttctcatgatcattcgatcagattatggctg
gctaccgatgatcaggtcttccttgaggaagaaagagaaaaggaaatggacgaattgtac
gagaacacgttattggactcattagaagacgacgaagctccagtgcgtgaaaacgaggaa
gatgacgaagaaatggatgaagttactaaggtaagtagacaaaccatggaaaccttgaag
gcaggtgaaaaattgatggaggctatggatattggtattgaagatgtcgaagccgacgaa
gagtaccagctcctattgaagaactacataaagactagtggtgctgttcttccagtgaag
ccaacttcaaactcaatcttgttagcatacaatatgtcaggacaagaatacgtacttagc
gttatttccaagatcaggtctgcgcaattggacgatgctcttttggtccttccattttca
tactcgcttcgtttgttgaagttcattgaaatctggaccagcaaggaacatgttaagacc
aacgttgtgaacatgtccttgatttgcaagatcttgttctttgttatccaatccaatgct
aaggaattaatcagtcagaaagatcctcaaatcaaaaaccagatgttgaaggtaaaagaa
cagttgagagacgagttgctgcagacctgtaagcaattgggtgtcaatacgcaagggtta
aggttcgcgaaacaacaatggaagttaacccacgagactgagtttatagacgaagctgag
caaagagagtacgaagacaagaaggcagccaagagaacttttgcaacgatatag
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