KEGG   Scheffersomyces stipitis: PICST_30256
Entry
PICST_30256       CDS       T01023                                 
Symbol
DIP2
Name
(RefSeq) beta transducin
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pic  Scheffersomyces stipitis
Pathway
pic03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PICST_30256 (DIP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pic03009]
    PICST_30256 (DIP2)
Ribosome biogenesis [BR:pic03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PICST_30256 (DIP2)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Utp12 ANAPC4_WD40 Beta-prop_VPS8 DSE1_N Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_SPT8 CFAP251_N Beta-prop_Nup120_160 Beta-prop_Aladin Beta-prop_Vps41 WD_LRWD1 RMC1_N Beta-prop_EIPR1 WDR54 PROPPIN Beta-prop_ACSF4 WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 4837349
NCBI-ProteinID: XP_001382680
JGI: 30256
UniProt: A3LQB6
LinkDB
Position
2:<2374693..>2377626
AA seq 977 aa
MVKSYDRYDQEKCFGVITSQSNILWLPPSDSQSAKSNGRAISSALEEILVWDIKTGEILQ
RLRDGLTPGASNAPTSHPPSPVTYLAHHSDTNILAAGHLDGSIKLWDLTSGSVIINFSGH
KSAISLLKFDRSGTRLCSGSSDSTIILWDLVGEEGLFKLKGHKSQITGVAFLSENESEEV
SDEMEDYLLSVSKDGLIKLWELKSQQCIETHLAHSNECWSLGINKSKNLAITSGNKDQVK
VWAIDLTQPDTQKIVEKGLFEKQSKARCNEISFKYIKSSTSIVELFSLQNADRTIEIFRV
RSSDEIKKGIARRTKRLREKGYEDNEILQSIQEAEVAMTISPFTTLRTVSKIKSCTWVAK
SSKKLDILISLTNNSIEYHNIPVPESFKKASASDIYSVKQHSIDLLGHRTDIRAMDISSD
SKLLATASNGELKIWNIKTTNVIRSFALEGGYALCCKFLPGGTLVVVGYKNGDLELYDLA
SSSLVDKVEKAHDSGNSMIANGNKEDENGSAIWSLDLTPDGKTLVTGGNDKSVKFWNFNV
EQEVIPGTNTTISNLKLVHTQTLELNEDVLCVKISPDAKYLAISLLNNNVQVVFFDSLKL
FLTLYGHKLPVLSIDISFDSKLIITSSADKNIKIWGLDFGDCHRSIFGHQDSIMNVRFIG
ETHHFFSSGKDGLIKYWDGDKFECIQKLAAHQSEVWCLSVSNDGLFMVTASHDHSIRLWS
ATDDQVFLEEEREKEMDELYENTLLDSLEDDEAPVRENEEDDEEMDEVTKVSRQTMETLK
AGEKLMEAMDIGIEDVEADEEYQLLLKNYIKTSGAVLPVKPTSNSILLAYNMSGQEYVLS
VISKIRSAQLDDALLVLPFSYSLRLLKFIEIWTSKEHVKTNVVNMSLICKILFFVIQSNA
KELISQKDPQIKNQMLKVKEQLRDELSQTCKQLGVNTQGLRFAKQQWKLTHETEFIDEAE
QREYEDKKAAKRTFATI
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggtcaagtcttacgatcgttatgaccaagagaagtgctttggagttataacttcacag
tctaatatcttgtggcttccaccttcggactctcaatctgccaaatctaatggtcgtgcc
atctcatcagctcttgaagagatcttggtttgggatatcaagacaggggaaattcttcaa
aggttaagagatggattgactcctggggcttctaatgcccctacttctcatcctccatca
cctgtaacatacttagcccaccatagtgatacgaacatcctagcagctggccatcttgat
ggatcgatcaagttatgggatctcacttcgggcctggttatcattaacttcctgggacat
aaatcagctataagtcttttgaaatttgacagaagtggtaccagattgtgttctggatcc
tcagactctaccataattttgtgggatcttgtaggagaagaaggtttgttcaaattgaag
ggtcataagagccaaatcaccggcgtagcatttctttccgagaatgaactggaggaagtc
agtgatgaaatggaagactatttgttatctgtttccaaggatgggttgatcaaattgtgg
gagttgaagagtcagcaatgtatcgagacccacttagctcatagtaacgaatgttggtct
ctcggcataaataagtccaagaacttggccatcacttccggcaataaggatcaagtcaaa
gtgtgggctattgacctcactcaaccagacacacagaaaattgtagaaaaaggtttattt
gaaaagcaaagcaaagccagatgtaatgaaattctgttcaagtacatcaagagttcaact
tctattgtagagttgttctctctccagaacgctgatagaactatagaaatcttccgagtc
agatcgtctgacgaaattaagaagggtattgcaagaagaacaaaaagacttcgcgaaaag
ggctacgaagacaatgagatcttgcaatcgatacaggaagcagaagttgccatgaccatc
tctccattcaccacattaagaaccgtctctaagatcaagtcttgtacttgggtagccaag
tcgagcaagaagcttgatatcttgatttcattaaccaataacagcatagaatatcataac
atcccagttccagaactgttcaaaaaagcgtccgcttctgacatatattctgtcaaacag
cactcgatcgacttactaggtcataggactgacatcagagccatggacatctcatccgat
tccaagttgttagccactgcatctaacggtgaattgaagatctggaatatcaagactact
aacgtcattagatcgtttgcattggaagggggttacgcattatgttgtaagttcttacct
ggtggcacattggttgtcgtaggctacaagaatggtgatttggagttgtacgatcttgca
tcatcttctttggtagataaagtcgagaaggctcatgattcaggcaactccatgatagca
aatggtaacaaagaagacgaaaatgggtctgctatttggtctttggatttgactccagat
ggaaagactttagttactggtggtaacgataaatctgttaaattttggaacttcaacgtt
gaacaagaggtaatcccaggcacaaatacgacaatttcgaacttgaaattagtccacaca
caaaccttagaacttaatgaggacgttttgtgtgtcaaaatttctcctgatgccaagtac
ttggcaatttcgttattgaacaacaatgtccaggttgttttctttgacagcttgaagttg
ttccttacattatacggtcacaaattgccagttttgtcgatcgatatctccttcgattct
aaattgatcatcacttcttcagctgacaagaacatcaagatctggggtttggactttggg
gattgtcatcgttctatttttggtcaccaagattcgatcatgaatgtcagatttattggt
gaaactcaccatttcttctcttcaggcaaagatgggttaattaagtattgggatggtgat
aagtttgagtgtatccagaagcttgctgcccaccaatctgaagtatggtgcttgagtgtc
agtaatgatggcttgttcatggtcactgcttctcatgatcattcgatcagattatggctg
gctaccgatgatcaggtcttccttgaggaagaaagagaaaaggaaatggacgaattgtac
gagaacacgttattggactcattagaagacgacgaagctccagtgcgtgaaaacgaggaa
gatgacgaagaaatggatgaagttactaaggtaagtagacaaaccatggaaaccttgaag
gcaggtgaaaaattgatggaggctatggatattggtattgaagatgtcgaagccgacgaa
gagtaccagctcctattgaagaactacataaagactagtggtgctgttcttccagtgaag
ccaacttcaaactcaatcttgttagcatacaatatgtcaggacaagaatacgtacttagc
gttatttccaagatcaggtctgcgcaattggacgatgctcttttggtccttccattttca
tactcgcttcgtttgttgaagttcattgaaatctggaccagcaaggaacatgttaagacc
aacgttgtgaacatgtccttgatttgcaagatcttgttctttgttatccaatccaatgct
aaggaattaatcagtcagaaagatcctcaaatcaaaaaccagatgttgaaggtaaaagaa
cagttgagagacgagttgctgcagacctgtaagcaattgggtgtcaatacgcaagggtta
aggttcgcgaaacaacaatggaagttaacccacgagactgagtttatagacgaagctgag
caaagagagtacgaagacaagaaggcagccaagagaacttttgcaacgatatag

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