Scheffersomyces stipitis: PICST_31254
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Entry
PICST_31254 CDS
T01023
Name
(RefSeq) predicted protein
KO
K18724
nucleoporin POM34
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_31254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_31254
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_31254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPCC
DUF960
Motif
Other DBs
NCBI-GeneID:
4838948
NCBI-ProteinID:
XP_001384364
JGI:
31254
UniProt:
A3LT19
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Position
4:complement(<328149..>329852)
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AA seq
567 aa
AA seq
DB search
MTGPNASFNDTVFEDAVDYSFSYTSKYPTGSQVGINDITIYDTPLRKLPNNSISNSQFTH
SISQGALYRDLGGVGHESSSTVPYQSAKGSESSSISRFPINFRRYDDVNISNDISYDVDS
LSGSSGNLPVNSSNYAVDSTSLRDASFRIHQTKLMLSKEKEVQSEVKSLGNNGSPLYYRP
STSNIKDNQYGIRSFLPPNVILGSTDKTEQSAKNRNKVPLFVNRPPPNGTNLQGQNSVDV
RQVYKQIKTQYEDDELDDNSSDPAVLNPQGEWMNPFMRQALSRQINKEDEIKKCLKNVIY
LISFALLKSSVNKLLVLYELKKRSSITYQLQLQYQKHTPSDVLDIMDNLYVVIFGRLIIG
LFVLNIIVSLMRIVQGSDPCKDLPLSDKQRELIGVEREKNNLQDTRSQLLGGVDDPEDRK
DEDAELILKQRKYQLNNNTDQIQKMPKYNKLSGYTSYNLNSNIDSNAVATVTSSQSLYSV
RNAASAAVGTGRYVSNTSNAGYISGTGNSLGLVGSQPSSSQFLTNNKVPSSRLSMSLNRA
SKLDEEKMKEEAYKFHRNFDIDFNYDT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacctaacgcctcgttcaatgacacagtctttgaggatgccgtggactactca
ttttcgtacacttctaagtaccctaccggaagtcaggttggtatcaacgacatcacaatc
tacgatactccgttgagaaagcttcctaataactcgatatcaaactcacagtttacgcat
agcattctgcaaggagctttgtaccgcgatttgggtggtgtggggcatgaatcgtcttct
actgttccatatcagtctgcgaagggaagtgaaagcagttctatttccaggtttccaatc
aatttcagacgatacgatgatgtaaatatcagcaacgatatttcttatgatgtggatagt
ctttctggaagttctggtaacttgccggtgaattcttccaactatgcagtagattcgacc
ctgctcagagatgcttctttcaggattcatcaaaccaagctcatgctttctaaagaaaaa
gaggttcaatcggaggtaaaaagtttgggaaacaatggcagtccactctactacagacct
tcaacgtcaaacataaaagataaccaatatgggatacgaagctttctccctccgaacgta
attctaggcagcacagacaagacagagcaatcggccaagaaccgaaacaaagtgccactt
tttgtaaatagaccaccacctaatggcacaaatttgcagggacaaaattcggttgatgtc
agacaggtttacaagcaaatcaagactcagtacgaggatgacgaattggatgacaattct
ctggatccagcggtcttgaatccccagggagaatggatgaatccgttcatgagacaagct
ctttccaggcagattaacaaggaggacgagatcaagaagtgtttgaagaatgtcatatat
ctcatttcgtttgccttgctcaagtcgctggtgaacaaacttcttgtgttgtacgaattg
aaaaaaagatcttcgataacttatcaattacagcttcaataccagaaacatacgcctctg
gacgtcttggatatcatggacaacttgtacgtggtaatatttggccgtcttataataggt
ttgtttgtacttaacatcatagtatcgttgatgagaattgttcagggtctggacccgtgt
aaggatttgccgttaagcgacaaacagagagagcttataggtgtggaaagagaaaagaac
aacttgcaggatacaagactgcaactacttggaggtgtagatgaccctgaagacagaaaa
gacgaggatgctgagctcatacttaagcaaagaaaatatcaactaaacaataacaccgat
cagatccagaaaatgccaaagtacaacaaattgagtggctacacgtcctacaatcttaat
ctgaacattgattctaatgctgttgctactgttacgagttctcagtcgttgtatctggtt
agaaatgcagcttcggctgctgttggtactggtcgttatgttagtaatacttctaatgct
ggttacataagtggtactggaaatagccttgggcttgtaggaagtcaaccttccagctcc
cagtttttgaccaacaacaaggttccttcgagccggttgtccatgtcgctcaatcgagcc
agcaagttggacgaagaaaagatgaaagaggaagcatacaagtttcacaggaactttgat
atagatttcaattacgacacctaa
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