KEGG   Scheffersomyces stipitis: PICST_31254
Entry
PICST_31254       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K18724  nucleoporin POM34
Organism
pic  Scheffersomyces stipitis
Pathway
pic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PICST_31254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_31254
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PICST_31254
SSDB
Motif
Pfam: NPCC DUF960
Other DBs
NCBI-GeneID: 4838948
NCBI-ProteinID: XP_001384364
JGI: 31254
UniProt: A3LT19
LinkDB
Position
4:complement(<328149..>329852)
AA seq 567 aa
MTGPNASFNDTVFEDAVDYSFSYTSKYPTGSQVGINDITIYDTPLRKLPNNSISNSQFTH
SISQGALYRDLGGVGHESSSTVPYQSAKGSESSSISRFPINFRRYDDVNISNDISYDVDS
LSGSSGNLPVNSSNYAVDSTSLRDASFRIHQTKLMLSKEKEVQSEVKSLGNNGSPLYYRP
STSNIKDNQYGIRSFLPPNVILGSTDKTEQSAKNRNKVPLFVNRPPPNGTNLQGQNSVDV
RQVYKQIKTQYEDDELDDNSSDPAVLNPQGEWMNPFMRQALSRQINKEDEIKKCLKNVIY
LISFALLKSSVNKLLVLYELKKRSSITYQLQLQYQKHTPSDVLDIMDNLYVVIFGRLIIG
LFVLNIIVSLMRIVQGSDPCKDLPLSDKQRELIGVEREKNNLQDTRSQLLGGVDDPEDRK
DEDAELILKQRKYQLNNNTDQIQKMPKYNKLSGYTSYNLNSNIDSNAVATVTSSQSLYSV
RNAASAAVGTGRYVSNTSNAGYISGTGNSLGLVGSQPSSSQFLTNNKVPSSRLSMSLNRA
SKLDEEKMKEEAYKFHRNFDIDFNYDT
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgacaggacctaacgcctcgttcaatgacacagtctttgaggatgccgtggactactca
ttttcgtacacttctaagtaccctaccggaagtcaggttggtatcaacgacatcacaatc
tacgatactccgttgagaaagcttcctaataactcgatatcaaactcacagtttacgcat
agcattctgcaaggagctttgtaccgcgatttgggtggtgtggggcatgaatcgtcttct
actgttccatatcagtctgcgaagggaagtgaaagcagttctatttccaggtttccaatc
aatttcagacgatacgatgatgtaaatatcagcaacgatatttcttatgatgtggatagt
ctttctggaagttctggtaacttgccggtgaattcttccaactatgcagtagattcgacc
ctgctcagagatgcttctttcaggattcatcaaaccaagctcatgctttctaaagaaaaa
gaggttcaatcggaggtaaaaagtttgggaaacaatggcagtccactctactacagacct
tcaacgtcaaacataaaagataaccaatatgggatacgaagctttctccctccgaacgta
attctaggcagcacagacaagacagagcaatcggccaagaaccgaaacaaagtgccactt
tttgtaaatagaccaccacctaatggcacaaatttgcagggacaaaattcggttgatgtc
agacaggtttacaagcaaatcaagactcagtacgaggatgacgaattggatgacaattct
ctggatccagcggtcttgaatccccagggagaatggatgaatccgttcatgagacaagct
ctttccaggcagattaacaaggaggacgagatcaagaagtgtttgaagaatgtcatatat
ctcatttcgtttgccttgctcaagtcgctggtgaacaaacttcttgtgttgtacgaattg
aaaaaaagatcttcgataacttatcaattacagcttcaataccagaaacatacgcctctg
gacgtcttggatatcatggacaacttgtacgtggtaatatttggccgtcttataataggt
ttgtttgtacttaacatcatagtatcgttgatgagaattgttcagggtctggacccgtgt
aaggatttgccgttaagcgacaaacagagagagcttataggtgtggaaagagaaaagaac
aacttgcaggatacaagactgcaactacttggaggtgtagatgaccctgaagacagaaaa
gacgaggatgctgagctcatacttaagcaaagaaaatatcaactaaacaataacaccgat
cagatccagaaaatgccaaagtacaacaaattgagtggctacacgtcctacaatcttaat
ctgaacattgattctaatgctgttgctactgttacgagttctcagtcgttgtatctggtt
agaaatgcagcttcggctgctgttggtactggtcgttatgttagtaatacttctaatgct
ggttacataagtggtactggaaatagccttgggcttgtaggaagtcaaccttccagctcc
cagtttttgaccaacaacaaggttccttcgagccggttgtccatgtcgctcaatcgagcc
agcaagttggacgaagaaaagatgaaagaggaagcatacaagtttcacaggaactttgat
atagatttcaattacgacacctaa

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