Scheffersomyces stipitis: PICST_31379
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Entry
PICST_31379 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
pic
Scheffersomyces stipitis
Pathway
pic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PICST_31379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_31379
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PICST_31379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
PRP6_TPR
HAT_Syf1_CNRKL1_N
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
4839032
NCBI-ProteinID:
XP_001384089
JGI:
31379
UniProt:
A3LTE6
LinkDB
All DBs
Position
4:<647470..>649943
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AA seq
722 aa
AA seq
DB search
MFINDNNRKRLALDVVGQLEEDLEADPLNYAKWNRLIKHVVAKDKEEQVRAIYTKYLGIF
KSDGEQWCKYINYELNRGEFQKVESLFHQCFLITDNVELCRLYVSYVRRVNDVITGGEKA
RGTVIQAFEFAINKVGIDINSTALWNDYLEFLKSWTPAASWEQQQKVDLIRKVYKKFLIV
PTENLENSWSQYTKWENEVNPATAAKFISEKSAEFMLARSWNTEWQNITERKLMRDIYPF
SATGEKEKIIRNQVGYWLNWVELEKKNILELKEDLLEKRIAFTYRQATFALPFVPELWFK
ASKFLLLSNEEANINRCVDLLSEGLSLNPRSLLLSFQLAELHEKDAGFEKSKDIYNNLAK
WLTIDYTKTTEQLESLRSRFEIPSNGDDNDENDPESFNNDDDMQIDTKKVYQLTSEDKKH
LATLSKKQTELAKSVTLVYVKWMTASKRAEGIKEARSVFKSAKKFASIGSELFVENALLE
HYADNKKVALKIFDLGMKAYATDGDFLFSYLEYLIMINDVDNIRILIQTSDTNLTKDIVS
LTEAVQLGSLNEYLKELKEDEIEVKRGYLRKLFKRYISYASKYVSLDVAQSFVNKYEQTF
PDDDPIELFSDRYTQGDDNLIEKLDLGIDSSTSLPPSKKRKVNAKSDIEDNNRDLDDRDG
IFSAPQPPVLEPEQPSSFVGPTITTLLAALPNASYFGQPSESVFNSEKLVKLFSNLPNIP
VD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttcataaacgacaacaacagaaaacgtttggcgttggatgtggttggccaactagag
gaagatttagaggcagatcccttgaactatgccaaatggaacagactcattaaacatgtg
gtggccaaagacaaagaagaacaagtcagggccatctacaccaagtacctcggcatcttc
aagtctgacggagagcagtggtgcaaatatatcaactacgagttgaaccgaggcgagttc
caaaaggtagaatctctatttcaccagtgtttcttgattacagacaacgtagaactttgt
cgtttatacgtatcgtacgtacgtcgtgtcaacgatgttattactggtggtgaaaaagcc
agaggcacggtcattcaggcgtttgaattcgccatcaacaaagttggaatagatatcaat
agcacggctttgtggaatgactacttagaattcctcaagtcgtggactcctgctgctagt
tgggaacagcaacagaaagttgatttgataagaaaagtctacaaaaagtttttgattgtt
cccacggaaaacttggagaactcgtggtctcaatatactaaatgggaaaatgaagtcaac
ccagctacagcagccaagttcatctctgaaaagtctgccgaatttatgcttgccagatcg
tggaataccgaatggcagaacatcaccgaaaggaagttgatgagagacatttatccgttc
tcagctactggtgaaaaggaaaagattattaggaaccaagtcggttattggctcaattgg
gtcgagttagaaaagaaaaatatattggagttgaaggaagatttgcttgagaagagaata
gcatttacatatagacaagctacgtttgcattgccgtttgttccggaattgtggtttaaa
gctagtaaattcttgcttcttagtaatgaggaagcaaacattaatagatgtgtagatctc
ttaagtgagggtttgctgttaaaccccagaagtcttctcctttcatttcagctagccgaa
ttgcatgaaaaggacgctggattcgaaaaatcaaaggatatctacaataatcttgcgaag
tggttaactattgactacaccaaaactactgagcagttagagtcgcttagatcacgtttt
gaaatccccagcaatggcgatgacaacgatgaaaatgatccagagtccttcaacaacgac
gacgatatgcaaatagataccaagaaagtgtaccaactcacttctgaagacaaaaagcat
cttgcgactttgagtaagaaacaaactgaacttgcaaaatctgtaacattagtctacgtg
aagtggatgacagcctccaaacgagcagaaggaattaaggaggcacgtagtgttttcaag
ctggccaagaagtttgccagcataggcagtgagttgttcgtggaaaatgctcttttagag
cattatgccgacaacaagaaagtagccttgaagatctttgatttgggtatgaaagcttac
gctacagacggagacttcttattttcctatttggagtatttaatcatgatcaatgatgtg
gataacatcagaatcttgatccaaacgtcagacaccaacctcacgaaagacatcgtttct
ttaactgaagcagtacaactaggtctgttgaatgaatacttgaaggagttgaaggaagat
gagattgaagtgaagagaggctacttgagaaagttatttaagcgatacatttcctatgcc
tcaaaatatgtttctttggatgttgctcaaagttttgtaaataagtacgagcaaactttt
cccgatgacgaccccatcgagttgtttagcgatagatacacacaaggtgacgacaacttg
atagaaaaacttgatttgggaattgatagttctacatctttgccgcccagcaagaagaga
aaggtcaatgctaagtctgatatcgaagacaacaacagagacttggacgaccgtgacggt
atattcagcgctccacaaccaccagtgttggagcctgaacagcccagctcttttgtgggg
cctactatcaccactcttttagcagccttacccaacgcctcttactttggacagccttca
gagagtgtcttcaatagtgagaaattggtcaagttgttttccaatttgcccaacattcct
gttgattga
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