KEGG   Scheffersomyces stipitis: PICST_31379
Entry
PICST_31379       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K14408  cleavage stimulation factor subunit 3
Organism
pic  Scheffersomyces stipitis
Pathway
pic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PICST_31379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_31379
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     PICST_31379
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C PRP6_TPR HAT_Syf1_CNRKL1_N FANCI_S1-cap
Other DBs
NCBI-GeneID: 4839032
NCBI-ProteinID: XP_001384089
JGI: 31379
UniProt: A3LTE6
LinkDB
Position
4:<647470..>649943
AA seq 722 aa
MFINDNNRKRLALDVVGQLEEDLEADPLNYAKWNRLIKHVVAKDKEEQVRAIYTKYLGIF
KSDGEQWCKYINYELNRGEFQKVESLFHQCFLITDNVELCRLYVSYVRRVNDVITGGEKA
RGTVIQAFEFAINKVGIDINSTALWNDYLEFLKSWTPAASWEQQQKVDLIRKVYKKFLIV
PTENLENSWSQYTKWENEVNPATAAKFISEKSAEFMLARSWNTEWQNITERKLMRDIYPF
SATGEKEKIIRNQVGYWLNWVELEKKNILELKEDLLEKRIAFTYRQATFALPFVPELWFK
ASKFLLLSNEEANINRCVDLLSEGLSLNPRSLLLSFQLAELHEKDAGFEKSKDIYNNLAK
WLTIDYTKTTEQLESLRSRFEIPSNGDDNDENDPESFNNDDDMQIDTKKVYQLTSEDKKH
LATLSKKQTELAKSVTLVYVKWMTASKRAEGIKEARSVFKSAKKFASIGSELFVENALLE
HYADNKKVALKIFDLGMKAYATDGDFLFSYLEYLIMINDVDNIRILIQTSDTNLTKDIVS
LTEAVQLGSLNEYLKELKEDEIEVKRGYLRKLFKRYISYASKYVSLDVAQSFVNKYEQTF
PDDDPIELFSDRYTQGDDNLIEKLDLGIDSSTSLPPSKKRKVNAKSDIEDNNRDLDDRDG
IFSAPQPPVLEPEQPSSFVGPTITTLLAALPNASYFGQPSESVFNSEKLVKLFSNLPNIP
VD
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgttcataaacgacaacaacagaaaacgtttggcgttggatgtggttggccaactagag
gaagatttagaggcagatcccttgaactatgccaaatggaacagactcattaaacatgtg
gtggccaaagacaaagaagaacaagtcagggccatctacaccaagtacctcggcatcttc
aagtctgacggagagcagtggtgcaaatatatcaactacgagttgaaccgaggcgagttc
caaaaggtagaatctctatttcaccagtgtttcttgattacagacaacgtagaactttgt
cgtttatacgtatcgtacgtacgtcgtgtcaacgatgttattactggtggtgaaaaagcc
agaggcacggtcattcaggcgtttgaattcgccatcaacaaagttggaatagatatcaat
agcacggctttgtggaatgactacttagaattcctcaagtcgtggactcctgctgctagt
tgggaacagcaacagaaagttgatttgataagaaaagtctacaaaaagtttttgattgtt
cccacggaaaacttggagaactcgtggtctcaatatactaaatgggaaaatgaagtcaac
ccagctacagcagccaagttcatctctgaaaagtctgccgaatttatgcttgccagatcg
tggaataccgaatggcagaacatcaccgaaaggaagttgatgagagacatttatccgttc
tcagctactggtgaaaaggaaaagattattaggaaccaagtcggttattggctcaattgg
gtcgagttagaaaagaaaaatatattggagttgaaggaagatttgcttgagaagagaata
gcatttacatatagacaagctacgtttgcattgccgtttgttccggaattgtggtttaaa
gctagtaaattcttgcttcttagtaatgaggaagcaaacattaatagatgtgtagatctc
ttaagtgagggtttgctgttaaaccccagaagtcttctcctttcatttcagctagccgaa
ttgcatgaaaaggacgctggattcgaaaaatcaaaggatatctacaataatcttgcgaag
tggttaactattgactacaccaaaactactgagcagttagagtcgcttagatcacgtttt
gaaatccccagcaatggcgatgacaacgatgaaaatgatccagagtccttcaacaacgac
gacgatatgcaaatagataccaagaaagtgtaccaactcacttctgaagacaaaaagcat
cttgcgactttgagtaagaaacaaactgaacttgcaaaatctgtaacattagtctacgtg
aagtggatgacagcctccaaacgagcagaaggaattaaggaggcacgtagtgttttcaag
ctggccaagaagtttgccagcataggcagtgagttgttcgtggaaaatgctcttttagag
cattatgccgacaacaagaaagtagccttgaagatctttgatttgggtatgaaagcttac
gctacagacggagacttcttattttcctatttggagtatttaatcatgatcaatgatgtg
gataacatcagaatcttgatccaaacgtcagacaccaacctcacgaaagacatcgtttct
ttaactgaagcagtacaactaggtctgttgaatgaatacttgaaggagttgaaggaagat
gagattgaagtgaagagaggctacttgagaaagttatttaagcgatacatttcctatgcc
tcaaaatatgtttctttggatgttgctcaaagttttgtaaataagtacgagcaaactttt
cccgatgacgaccccatcgagttgtttagcgatagatacacacaaggtgacgacaacttg
atagaaaaacttgatttgggaattgatagttctacatctttgccgcccagcaagaagaga
aaggtcaatgctaagtctgatatcgaagacaacaacagagacttggacgaccgtgacggt
atattcagcgctccacaaccaccagtgttggagcctgaacagcccagctcttttgtgggg
cctactatcaccactcttttagcagccttacccaacgcctcttactttggacagccttca
gagagtgtcttcaatagtgagaaattggtcaagttgttttccaatttgcccaacattcct
gttgattga

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