Scheffersomyces stipitis: PICST_31476
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Entry
PICST_31476 CDS
T01023
Symbol
NUP84
Name
(RefSeq) Nucleoporin NUP84 (Nuclear pore protein NUP84)
KO
K14301
nuclear pore complex protein Nup107
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_31476 (NUP84)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_31476 (NUP84)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_31476 (NUP84)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_31476 (NUP84)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PICST_31476 (NUP84)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
4838420
NCBI-ProteinID:
XP_001384477
JGI:
31476
UniProt:
A3LTN9
LinkDB
All DBs
Position
4:complement(<898505..>901039)
Genome browser
AA seq
844 aa
AA seq
DB search
MSQSRCRDIFHYLISINRTILQELPKLSPLPARKLGSYTCKTVHMTTTELLPFHAVGTSP
DAAAQADSNIETQFANVLHSLQVNKQRDPFDIIQDFKQICADRALSTRDKLSLDESNTAL
AEEFDNWDLEFKLWELVDRLFRFRALFSNKAKTELLREYDFSSMGIKQENFLRKNPAIRE
LSIIILWLQSHTPSLVGDETESYQTKWKNTAMAVANSDFDVLASRATDADLIDKLDIDAP
LRSNRSIHPADESNDSKVFAQIYKLLLQDRVQDAIDIANNTGNYALALILVGATQEYFDP
VLDKQDSDFDSIVAEQTKPSGIKHKLLWKKTVYKLSQQANLNKYEKLIYNYLCGGDISGN
LSVASDDWEQTLLLYLSQLYSYNIDNFIVSQLSSEQEILPVNIPKPQLNTIAEILNTISH
SGNLLTQQSENPLRVIMGSVMLDNVPSLLHNLTSSSTGEPEALKKPYISRVLTHLAIFQL
LVVGTDNINNEDITTIITSYTSKLAEYKLPELIPIYLSFVPNEKDSREAYALFLSSLTDS
SDRSKQIEISRRIANSISEVDEAMELAANTQEDKMMNVLRRTVERVMKDTESHYKPQAVI
EVQDDINSVDDIDSKLYHSVEWFYENKMYEDAIVATIAIIRRFLLCGKLAPLKAFSKGKN
FKLLLVEYDTQLQTKSLIFQNEPEIVTEEDKEELLAYASLIEGLILIDEWKKFVSTQINS
QGKWLSTGVDSSIDKTSKTLLNLIFKWFKNTSSEKDSDLAIYSEFRSIYVPYLIIELLKI
FQNAREKDWKYMRSAFSLINDVANEEQNDFLSCFLKCGRLDEFLVKAGEVSIVAVEKGIS
GIFY
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtcacgatgtcgtgatatttttcactacttaatttcgataaacagaactatt
cttcaagagttacctaagctatctcctttgccagcgagaaaattgggctcttacacttgc
aaaacagtgcacatgacgactacggagttattgccctttcatgccgttggcacgtcacca
gatgccgcagcccaggccgactccaacatagagacgcagtttgccaatgtgctccattca
ctacaagtgaacaaacagagggatccatttgatatcattcaggatttcaagcagatttgc
gctgacagggcactttctactcgtgacaaactttcacttgacgaaagcaataccgcactt
gctgaagagtttgacaactgggacttggagttcaaactctgggaacttgttgatcggttg
ttccgtttccgagctctattcagcaataaagccaaaaccgaattgcttcgtgaatacgac
ttttcgtctatgggaatcaagcaggagaactttttgcggaaaaatccagcgatcagagag
ctttccatcatcatcctctggctccagtcgcatactccatctcttgtaggagacgaaacc
gaatcttaccagacgaaatggaagaatactgccatggccgttgcaaattccgacttcgat
gtcttagctagtcgagctactgatgctgatttgattgataagctcgatatagatgcacct
ttgcgtagtaatagatccattcatccagcagatgaatccaacgactctaaagtatttgct
cagatctacaagttgcttcttcaggatagggtccaggatgcaattgatattgccaacaat
acgggtaattatgctttggctttgattcttgtcggcgctacccaggagtactttgatcct
gttctagacaagcaggatctggactttgattctattgtagcagaacagacaaaaccttcc
ggtatcaagcacaagcttttatggaagaaaacagtgtacaaactctcgcaacaggcgaac
ttgaacaagtacgagaagttgatctataattacttgtgcggcggtgacatttcaggcaac
ttactggtggcttctgatgactgggaacagactttacttttgtatttgagtcagctctac
tcctacaacattgacaattttattgtatcgcagttgtcttctgaacaggagattttgcct
gtcaacattcccaagcctcagctaaacacgattgctgaaatcttgaataccatactgcac
tcaggtaatttgttgactcagcagagtgaaaacccgctcagagtcatcatgggaagcgtg
atgttagataatgtcccttctttattgcataatttgaccagttcactgactggagagcca
gaagctctcaagaaaccatacatttccagagtgctaactcatttggctatattccagctt
ctagtagtaggtacagacaacatcaacaacgaggatatcacgactataattacctcgtac
acgtccaaattggcagagtacaagttgcctgaacttattcctatctatctatcgtttgta
cctaacgaaaaggactctcgtgaagcgtatgcacttttcttgtcctcgttgacagactca
tctgatcgtagcaaacagatagaaatctcgcgcagaattgcaaattcgatctcagaagta
gacgaggctatggagctcgctgcaaatacccaggaagacaagatgatgaatgttttgcgt
agaactgttgaaagggtgatgaaagatactgaatcgcactataaaccacaggcagtaatt
gaagttcaggatgatatcaactctgtagatgatattgattccaagttgtaccactccgtt
gagtggttctatgagaataaaatgtatgaggatgcgattgtcgcaactattgccatcatc
agaagatttcttctttgcggaaaactagctcctttaaaagcatttagtaagggaaagaac
ttcaagttgttattagtcgaatacgatactcagcttcaaacaaagagtttaatttttcaa
aatgagccagagatcgtcacagaagaagacaaagaggaattgttagcgtacgcatctctc
atagaaggtttgatcttgatagacgagtggaagaagtttgtaagcactcaaatcaatagt
cagggtaagtggctttctactggtgtagatagctcgatagataaaacaagcaagacttta
ttgaatttgattttcaagtggttcaagaatacgtcatccgagaaagatagcgacttggca
atctactctgagttcagaagcatttatgttccgtacttgattatcgagttgttgaagatc
ttccaaaatgcaagagaaaaggactggaaatacatgagaagcgccttctcgttgattaat
gatgttgccaatgaagaacaaaacgacttcttgagctgtttcttgaaatgtggaagactc
gatgagtttttggtgaaggccggagaggtctcgatcgttgctgtagagaaaggaatctct
gggatattctactag
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