Scheffersomyces stipitis: PICST_31907
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Entry
PICST_31907 CDS
T01023
Symbol
DHR2
Name
(RefSeq) ATP-dependent RNA helicase DHR2 (DEAH-box RNA helicase DHR2) (Helicase JA2)
KO
K14781
ATP-dependent RNA helicase DHR2 [EC:
5.6.2.6
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_31907 (DHR2)
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PICST_31907 (DHR2)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
90S particles
Helicases
PICST_31907 (DHR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
Helicase_C
DEAD
HA2_C
AAA_22
AAA_29
AAA_19
DUF3381
FtsK_SpoIIIE
SAP_new25
AAA_23
Chal_sti_synt_C
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
4839693
NCBI-ProteinID:
XP_001385054
JGI:
31907
UniProt:
A3LUW0
LinkDB
All DBs
Position
5:complement(185143..187767)
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AA seq
830 aa
AA seq
DB search
MQLPYSGDGSAPASKKRKRKRNNKTKTKSDADAHLSQEHAVANENNFQIHSSNKKFKFDT
EEKEDVINQKNNDSVEKGNFEHHEEEDEGEEIIEDAPEKEEQVEERIEDEEEDEDDEEEN
KIKTKNPRKNKDKKKHKKDVELAKKAEQLLEFRKELPVYQHKDEVIDYVTNNQVTVVIGE
TGSGKSTQIPQFLMPLNSKSIAVTQPRRVAAASLAARVSEEYGCQLGQEVGYQVRFSNIT
HPQKTKLKYLTDGMLLRELMIDSKLSKYSTIILDEAHERTVLTDLIMGFLKQLIVTKTRR
DLKIIVMSATLNAELFSKFFGNAPILFIEGKMFPVSPFYLSDSSEDIVDTMVRSVIQINL
AEQEGDILCFLPGQEEIDSCVTVLTQVAPLLPKQAPLLVPMALYAALSPAKQAKIFEKLP
ARRRKVILATNIAETSITVSGVKYVIDSGLRKVKVWKHQLGLSTLLTTPISQASARQRAG
RAGRESAGKVYRLYSEKVFSDSLPKQQESEIMRNDVVMPILTLKKLGIDDLLNWSWLEHP
GQDAILSALNTLYSLGALNDSGKITPLGYKMAVLPLQPQLSVVLLTAFEFGVLSAVIDIV
SCLSVDNLVLNVGAANGELRDEVNYKRRQYCPLGIRHGDLIGLKEYFNYYQELSAAGNTG
ELKSWCKDLHLSYKGFKNVLKVRQQLKQYMITTIKQDDSIKREERDEQLKNLEAQLGIVN
LNNTNDSDIEDELKKPLDVPAVLKSFLKGYITNTAVGMPDRSYRTFNTGQLISIHPSSNL
FGKSNLDAIMYIEYVYTAKGYGRSCSAIELGWIQEVAPHILGASKINVHD
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcccgtattctggagacggttcggctccagcttcaaaaaagagaaagagaaag
agaaataataaaaccaagacaaagtctgatgccgatgctcatctcagtcaggaacatgca
gttgcaaatgaaaacaatttccagatccacagtagcaacaagaagttcaaatttgatacc
gaagaaaaggaagacgtgataaatcagaagaataacgattccgtcgaaaaaggaaatttt
gaacatcacgaagaggaggacgagggtgaagaaattattgaagatgctccagaaaaagaa
gaacaagtagaagaacgaatagaagatgaagaagaggatgaagatgatgaggaggagaat
aagatcaaaacaaaaaatcccaggaagaacaaagacaagaaaaagcacaaaaaagacgtt
gaattggccaaaaaggctgaacagttgcttgagttcagaaaagaacttccagtttaccaa
cacaaggatgaggtcatagattatgtcaccaacaaccaagtcactgtagtaattggtgaa
actgggtcaggtaaatctacccaaatcccccagttcttgatgcctctaaacagtaaactg
atagctgtaacacagccacgtagagttgctgctgcatctttggctgcgagagtcagtgaa
gagtatggatgtcaattaggacaagaagttggttaccaggtcagattctctaatatcact
catccacaaaagacgaagttgaagtatctcaccgatggtatgcttttgcgagaactcatg
atagacagcaagttgtcgaagtattccaccataatactagatgaagctcacgaaagaaca
gtattgacagatcttatcatgggattcttgaaacaacttattgtaactaaaaccagaaga
gatttgaaaatcatagtcatgtcggctacgttaaatgccgagctcttcagtaagttcttc
ggtaatgcccctattctcttcatagaaggtaaaatgtttcctgtgtctcccttctatttg
tctgactcttctgaggatattgtggataccatggtaaggagtgttattcaaatcaactta
gcagaacaagagggagatattctctgtttcttaccgggccaagaagaaatcgatagctgc
gtcaccgtattgactcaggtggcaccattgcttccaaaacaggcaccattgctagtacca
atggctctctacgctgctttgtctccagccaaacaagctaagatcttcgaaaagcttcct
gcaagaaggagaaaagttattctcgctaccaatattgccgaaacttccatcactgtcagt
ggtgtcaaatacgttatagactcaggattgagaaaagttaaagtatggaaacatcaattg
ggattatctacattattaaccactccaatttcacaggcttcagcaaggcaaagagctggt
agagctggtagagaatctgctggtaaagtctaccgtctttatctggagaaggtatttctg
gatctgcttcctaagcagcaggaatcggaaatcatgagaaatgacgtggtgatgcccatc
ttgacattaaagaagttaggaatagacgacttgttgaactggtcgtggttggagcatcct
ggccaggatgctatcttaagtgccttgaatactttatattctcttggggctttgaacgac
agcggcaagattacacctttgggatataagatggccgttttaccattacaaccacaacta
tcagtagttctcttaacagcttttgagtttggtgtgttgtctgctgttatagatattgta
tcgtgtctttccgtggacaacttggtattaaatgtaggagctgcaaatggcgaattacga
gacgaagtcaactacaaaagacgccagtattgtcctcttggtatccgacatggtgatttg
attggtcttaaagagtatttcaattactaccaagaactatctgcagcaggaaatacggga
gaacttaagtcgtggtgcaaagatttgcatttgagctataagggcttcaagaatgttctc
aaagtcagacaacagttgaaacaatatatgataactactatcaaacaagatgatagtatc
aagagggaagaaagagacgaacagttgaagaacttagaagctcagctaggcatagtaaac
ttgaacaacactaacgacagcgacattgaagacgagttgaagaagcctttggatgttcca
gcagttctcaagtcgttcttgaagggctacatcacgaatacagctgtaggaatgccggat
agatcgtatagaacgttcaacacaggtcaactcataagtatacatccatcttccaacctt
tttggtaagctgaacttggacgcaataatgtacatagagtacgtctacacggctaagggg
tacgggagaagttgttctgccattgaattgggttggatacaagaagtggcaccgcatatt
cttggagcatccaagatcaacgtgcacgattag
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