Scheffersomyces stipitis: PICST_32340
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Entry
PICST_32340 CDS
T01023
Name
(RefSeq) predicted protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_32340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_32340
Spliceosome [BR:
pic03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
PICST_32340
Complex B
PICST_32340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
Translat_reg
DUF5694
Motif
Other DBs
NCBI-GeneID:
4839336
NCBI-ProteinID:
XP_001385249
JGI:
32340
UniProt:
A3LW41
LinkDB
All DBs
Position
5:complement(1259819..1260845)
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AA seq
314 aa
AA seq
DB search
MTDNTEKYPPDIQKLFAPKPPLLYLSSSDFAAGQRATASITPVSAWRSEIDKYTVQLKEQ
DSSSIKKQPTKHQLQEEAAREKQLLKRESFKRQLREWNDPEILHQNEKEFMKDPYRTIFV
SRLDFSLTELDISKHFSKYGVIESVRIIRDSVTGKSRGYGFIVFEREWDAQSCISEVART
GVRLPQAKRTILVDIERGRIVSNWRPRRLGGGLGGRHYTRPDPRFNSTASAAASGRSINI
ANNPHIPSGHSGHRQQPSYYPPTQSTFKSYPKETEKKPEKSVKDKYAKYAAVSESSGGYR
SVGETRSIRSIRQG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgactgataatactgagaagtatcctccggatatccagaagctttttgcacccaaaccg
ccgctcttgtatttgctgtcttcagattttgcagctggacagagagccacagcatccata
acacccgtttcagcctggagatctgaaattgacaaatacaccgttcagttgaaggagcag
gattcttccagcataaagaaacaaccaacaaaacaccaattacaagaagaagctgctcgt
gaaaaacagcttctcaagcgagaatcgttcaaacgacaattgcgcgaatggaatgatccc
gaaatattgcatcaaaatgagaaagaattcatgaaagatccatatagaaccatctttgtc
tctcgtttagacttcagcttaaccgagcttgatatttctaagcatttcagcaagtatggc
gtgattgagtctgtgcgtattatacgtgactctgtaaccggtaaatctcgaggatacggc
ttcatagtgtttgaacgagagtgggatgcccagagctgtatcagtgaagtggcgagaaca
ggtgtaagacttccacaagcaaagagaactattttggtagatatagagaggggccgtata
gtgctgaactggcgtccgcgcagattaggaggaggtctaggaggtagacactatacgaga
cccgatccccgtttcaatagtacagcttcagctgcagccagtggtagaagtattaatatt
gctaacaacccacatataccgtctggtcatagtggccatcgccagcagccgtcatattat
cctccaacacagagtacgttcaagagctatcctaaagaaaccgaaaagaaaccggaaaag
tctgtcaaggacaagtatgccaagtatgctgctgttctggagtcgtctggtggttaccgt
tctgtgggagagacccggtcaatcagaagtataaggcaggggtaa
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