Scheffersomyces stipitis: PICST_32673
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Entry
PICST_32673 CDS
T01023
Symbol
TIP39
Name
(RefSeq) Tuftelin-interacting protein TIP39, contains G-patch domain
KO
K13103
tuftelin-interacting protein 11
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_32673 (TIP39)
Spliceosome [BR:
pic03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PICST_32673 (TIP39)
Other components
Complex C specific factors
PICST_32673 (TIP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
G-patch_2
GCFC
Helicase_IV_N
FAP206
Motif
Other DBs
NCBI-GeneID:
4840302
NCBI-ProteinID:
XP_001385756
JGI:
32673
UniProt:
A3LX28
LinkDB
All DBs
Position
6:complement(370409..372649)
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AA seq
746 aa
AA seq
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MSFSGLAFTKASNNNSNNDTTNNNVGSKPFSMMAAAVRDGYSDYEEEMEEDVVVHNNERD
SKSKFASPTESFNKNAAWLNPPTAVNSNFQKYGIGAQLLVKMGYQVGKGLGANEEGIVNP
IETMLRPKGLGVGGIRERKDSNRKKGNDDVDMDIESSDDESTSLQKRESINLYSIVEELE
LKNMTVPKKYIELSDQYSQNQYSEDLYDQVKEAYNQLSRISEELNSLDQQEKFITYQLKD
INLKSNTLESELSSTVVTLEKIEETLPILQNTKDSIAIIKEVDILLRSILETPSKSYPNI
SSLCGSIVAVAIPLLFNDGNIDEKSSSFNTLAEWSIIYREVEKSASSELSFFDSLIYPQI
ANQISKTISSTIPAEERSIQILNYLQFWLESPIIINPQFCIQEKLMSELVIPFISESIDQ
WNPLDPKDSSPTFLIDYLAGVVDGDISLFEEILQNVNQKYLDFINYNNPKSIWQNICKAT
SIEEIAWIEEINKFTKVWIPLFKEYPQLDFAASNGTELLEALTCGLQFPFNIRSDLRVKL
LLAFELLSLIEENDSVILLQFTWGNNWIESLLSMIEENPSRVAESYREWFKYFQETKNSY
SERILDVIKWYLDLVLNIIENGRDVANKLPNINGNAHPEKSEVLKLIQNSTSNEKEEHRS
VHGIPAYRLMTSFKDVVADYCLQKGLLFGSEKNRVHPTLGYPLYTIKSSRGTKLFCYADQ
DVLWIAQSGEAMEYDPISLDDLLSYL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttctgggactcgcatttaccaaagcaagtaataataattccaataatgatacg
actaataataatgtgggtagtaaacccttcagtatgatggcagcagcagttagagatgga
tattcagattatgaagaggagatggaggaagatgtagttgtacataacaatgagagagac
ctgaagtcaaagtttgcgtcacctacagaatcatttaacaagaatgccgcttggctcaac
ccaccgacggcagtgaattccaattttcagaagtatggaataggtgcacaactcttggtt
aaaatgggatatcaagtaggcaagggtctcggagctaatgaagaaggtattgttaatcca
atagagactatgttgcggccaaagggattgggtgtaggtggtatacgagaaagaaaggat
tcaaatcgaaagaaggggaacgatgatgtcgatatggatatcgaaagcagtgacgatgaa
ctgacatcattacaaaagagagaatcgattaacttatacagtattgtagaagagttggaa
ttgaaaaatatgactgttcccaaaaagtacatcgaattgtctgatcagtactctcaaaat
cagtactcagaggatctatacgatcaagttaaagaggcatacaatcaactcagcagaata
tcagaagaactcaattcgcttgatcaacaagaaaagttcataacatatcagttaaaggat
ataaatctcaagtcaaatacccttgaatcagaactttcttccactgtcgtcacgttagag
aaaattgaagaaacattaccgattctacagaacacgaaagattccatcgcaataattaaa
gaagtggatatactacttcgttcaatattggaaacaccactgaaatcatatcccaacatt
agttcattgtgtgggagcatagttgctgtggctataccattactcttcaatgatggaaac
attgatgagaaaagttcgagcttcaatacattagccgaatggtcgatcatctatagagaa
gtagaaaaaagtgcactgtcagaattgtcgttttttgattccttgatctatccccaaatt
gcaaatcaaatatcgaagactatttccctgacgatacctgcagaagaaaggagtattcaa
atattgaactatttgcaattctggcttgagtcaccgattatcataaacccacaattttgc
attcaagaaaagctcatgctggaactagtaattcccttcatatctgaatcaatagatcaa
tggaacccgcttgatcctaaagattcgtctccgacctttcttattgattatcttgccgga
gtagttgacggtgatatttctttatttgaagagattttacaaaatgtaaatcaaaaatat
ttggacttcataaactataacaatcccaaatctatttggcaaaacatttgcaaagcaact
ctgattgaagaaattgcttggatagaagaaatcaacaaatttaccaaagtatggattcct
cttttcaaggaatacccacaattagattttgctgcatccaatggaacagaacttttggaa
gccttgacatgtggactacagtttccttttaacattcgctcggatcttcgagtaaaatta
ttattagcatttgaattgctttctttgatagaagaaaatgattctgtcatattacttcag
ttcacctggggcaacaattggattgaatcactcttaagtatgattgaggaaaatccatcg
agagtcgcagaaagttacagagagtggtttaagtattttcaagaaacaaagaactcgtat
ctggaaagaatacttgatgtgattaaatggtacctagatcttgtattgaatattattgag
aatgggagggacgttgcaaataaacttccaaatattaatggaaatgcacacccagaaaag
tctgaagttttgaagttgatccaaaatagcacttcgaacgaaaaggaagagcatcgctct
gttcatggtattcccgcttaccgactaatgacatcattcaaagatgtcgtggcagattac
tgcttacagaagggattactttttggctccgaaaagaacagagtacatccgacattaggg
tatccactatacactataaagagttcgagaggtacaaagctcttctgctatgccgatcag
gatgtgctttggattgcacaaagtggcgaagctatggaatatgatcctatttcgcttgac
gacttactactgtatttatag
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