Scheffersomyces stipitis: PICST_32922
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Entry
PICST_32922 CDS
T01023
Name
(RefSeq) predicted protein
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_32922
Enzymes [BR:
pic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
PICST_32922
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
PICST_32922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
zf-TRM13_CCCH
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
4840039
NCBI-ProteinID:
XP_001385547
JGI:
32922
UniProt:
A3LXS6
LinkDB
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Position
6:<971788..>973050
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AA seq
420 aa
AA seq
DB search
MIKKNRRCAMRRKGSQKYCSEHIIYNESSSIVNTDTKLSEDERVPCPLDGKHTVWKKNLA
VHLKKCNAKPVERTEEWFSKDINVKLKNSLGETEDITRSEDKTLDEKDLYSKYIPIIEGI
NFEPLQYRISEHSGLQQRLNEVLIQKHALQQSSLIGNIKDAKLLSPNNTFVEFGCGKAEL
SRFVNLCLLDDLKQKVNNEVTLENYGYGFIDRGVNRMKMDKKILKDCLDSPIEITPRIQR
TRIDIKDLDLDKFINKLQPSKIVAISKHLCGAATDLTLKSLLNSSLLSDNRDKFGGLLIA
MCCRHVCSYDQLLPKSREYLAEKGFKTPDSFRILKKMVSWAVCSKKEHAKNVERLEAEHI
SQLDYSSRERLGFVARRLIDESRVYALKSMLSGFEVKMFWYVEKDVTLENVCLYVGQEPM
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaagaacagaagatgtgctatgcgaagaaaaggttctcaaaagtactgttcc
gaacatataatctacaacgaaagcagcagtatagtaaacaccgatacgaagctctcagag
gatgaaagggttccgtgtcctcttgatggaaaacatacagtttggaagaagaatctcgct
gtccacttgaagaaatgtaatgccaaaccggttgagagaaccgaagaatggttctcaaag
gacatcaacgtaaaattaaagaacctgctaggcgagacagaagatattacgaggtcagag
gacaaaactttggacgaaaaagacctctactccaagtacattcctattatagaaggaatt
aatttcgagcctctacagtatcgaatcagcgaacattcaggcttgcagcagaggttgaac
gaagtccttatacaaaagcatgccttgcaacagtcctcgttgatcgggaacatcaaagat
gctaagcttttactgccaaacaatacgtttgtagaatttggatgcggaaaagccgaattg
ctgagattcgtcaacctctgtcttctcgatgatttgaagcagaaggtaaataacgaggta
acactagaaaactatggatatgggttcatagatcgtggagtcaataggatgaagatggat
aagaagattttaaaggactgcttagactctccgattgaaataacacccagaatacaaaga
actaggattgatatcaaggatttagacttggacaaatttatcaataagcttcaaccttcg
aagattgttgcaatctccaaacacttgtgtggtgcagccaccgatttgacattgaaactg
ttgctcaattcatcacttttatctgataatagggataagtttggcggcctattaattgcc
atgtgctgtaggcatgtgtgctcatatgaccaattacttcctaaatcgcgagagtatctt
gccgagaaaggtttcaagactccagattcgtttcgaatactcaaaaagatggtttcatgg
gcagtgtgcagtaagaaagaacacgcaaagaatgtcgagagattggaagctgagcatata
agccaattggattactctagtagggagaggttggggtttgttgctcgtagattaattgac
gaaagcagagtatatgcattgaagtccatgttgagtgggtttgaggtgaagatgttctgg
tacgtcgagaaggatgtcacattggaaaatgtatgtctctatgtcggccaggagccaatg
taa
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