Scheffersomyces stipitis: PICST_33173
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Entry
PICST_33173 CDS
T01023
Name
(RefSeq) predicted protein
KO
K18723
nucleoporin GLE1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
pic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_33173
03015 mRNA surveillance pathway
PICST_33173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_33173
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_33173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
4840170
NCBI-ProteinID:
XP_001386008
JGI:
33173
UniProt:
A3LYH3
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All DBs
Position
6:complement(1601613..1603202)
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AA seq
474 aa
AA seq
DB search
MRFGIPADFQLLVEVSTPTGESNYLHDHISHKLQQLKLDVENLQSKLHHNSVNEKAAIDA
FNTDVQQSIQSQNVLVQKLINDEKERIRRIEEMKRQKEEEQRRRLEEEKRRREEEARRKR
EDDERKRKEQEAKLAEERRLKQERDEREKQHKLELEKQRREKERLEAEAKKEAEQRKAAQ
QNSLTDFAAIEQSFLQYKKNIVDIKETIVGPMNEDKDLKKLVNSLKRKINPKFGQLSNSY
QQLNRIKHEVVELVSQAKGNELAYKWILNFVAKAIVDQAETEVIVKPNAALPLAHLAYTL
LETFTEFDYYLSSRFVKKCPYIIGYTCSIDSEEGRTRMGWKRRDNKWEDDTKYDERVSGI
CMVWATMSRLLDYPQQLSFYSFEASWKFLARLLNRDLSLLTNAHFSILGNWWEAAAKEFS
GKYGVQASKLLNVLTVDLPVAVSDRKYPAAARLLILGEDLQNNRNWNSLKEMER
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagattcgggattcctgccgacttccagctcttggtggaagtttccactccaactgga
gaatcgaactatcttcacgatcacatatctcacaagcttcagcaactcaagctcgatgta
gagaacttacaaagcaaacttcaccataactccgtcaatgaaaaagcagctatcgacgct
tttaacacagatgtccaacaatcgattcagtcgcagaatgttcttgttcagaaactcata
aacgacgagaaggaaaggatacgacgtatcgaggaaatgaagagacaaaaggaggaggaa
caaagacgtcgcctagaggaagagaaacgccgcagagaggaagaagcaagacgcaaaagg
gaagatgacgaacgcaaacgcaaggaacaggaagctaagttggcagaagaaagaagactc
aaacaagaaagagatgaaagggaaaagcagcataaactcgagctcgaaaaacaacgaagg
gaaaaggagcgactagaagctgaagctaaaaaggaggccgaacagagaaaagctgcccaa
caaaactcattgacagactttgctgctattgagcagagctttttacaatataagaagaat
atcgttgatatcaaggaaaccattgttggtcctatgaatgaagataaggacttgaaaaaa
ttagtcaactcgttgaaacgtaaaatcaaccctaaattcggacaattgtctaattcatac
caacagctcaacagaattaaacatgaagtagtagaattagtttcccaagccaagggtaac
gaattagcctataagtggatcttgaacttcgtggccaaagcaatagttgaccaagctgaa
accgaagttatagtcaagcccaatgctgctttgccattggcacatcttgcatatacttta
ctagagacattcacggagttcgactactatttgtcatccaggtttgtcaaaaaatgtcca
tacattatcggctatacctgctccatagactcggaagaaggaaggactagaatgggttgg
aaaagaagagataacaagtgggaagatgacaccaaatatgacgaaagagtgtccggaatt
tgtatggtttgggccactatgagtagactacttgattatcctcaacagctttcattctat
tcttttgaagcttcgtggaaattccttgctcgtctccttaatagagatctcagcctcctt
accaatgcccatttctctattttgggcaattggtgggaagcggccgctaaggagttttcc
ggaaagtatggcgttcaagcttctaaacttttgaacgttttaacagtagacttgcctgtt
gcagttagcgacagaaagtatccagctgctgctaggcttctcatcctaggagaagacctt
cagaataatcgcaactggaacagcctcaaggaaatggaacgatag
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