Scheffersomyces stipitis: PICST_33477
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Entry
PICST_33477 CDS
T01023
Symbol
RIB2
Name
(RefSeq) DRAP deaminase
KO
K14655
tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:
5.4.99.28
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00740
Riboflavin metabolism
pic01100
Metabolic pathways
pic01240
Biosynthesis of cofactors
Module
pic_M00911
Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
PICST_33477 (RIB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_33477 (RIB2)
Enzymes [BR:
pic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
PICST_33477 (RIB2)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PICST_33477 (RIB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Inv-AAD
dCMP_cyt_deam_1
MafB19-deam
S4
Bd3614-deam
XOO_2897-deam
APOBEC_N
Motif
Other DBs
NCBI-GeneID:
4840702
NCBI-ProteinID:
XP_001386154
JGI:
33477
UniProt:
A3LZB1
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Position
7:<737974..>739731
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AA seq
585 aa
AA seq
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MSERVEVSQDKGVKRPASPSPAAQDSKLRDSQGFRMKRQVIDKVTLTAYEQLGGEDASDS
TIQQGKTIEEEEAEGASYIIDGRLRRVHPYYFTYLTYCKMRWRDRKLLDIFVDEFRDRSA
EYYKKAIDAGQVTLNKKPANLDSIVRNGDLISHRTYRKEPPVSSREIKIVYEDDDLIAID
KPSGIPVHPTGRYRYNTITKIFQHEMGKVVHPCNRLDRLTSGLMFLGKTAKGADKLVKQI
RERSVRKEYIARVKGEFPLEEVEVDQPMRTIAHKLGLNRIDLKEGKDAKTAFKRVSYDPE
HDTSIVKCIPLTGRTHQIRVHLQYLGHPIANDPIYSNKFVWGNNLGKDNEGDSNEIIQRL
DRIGKDKAASSWAHPEEDGELITDEIDEISGMPVYSDPGPNDLDLWLHAYKYEAADKSWS
YKTEYPEWAIGPHRKFMELSLEMANKCDETQTQYNVGAVLVNRGKVLATGHSRELPGNTH
AEQCALEKYFEETGKREIPKGTEIYTTMEPCTLRLSGNIPCADRIIGTTIKTCFVGIVEP
DTFVKNNSCSAKFAENGIEYIHIPGYEEECLKIATKGHEKLSKDS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaagagtcgaagtttcccaagacaaaggagttaaaagaccggcatctccatct
cctgctgctcaggattcaaagctcagggatagtcagggcttcagaatgaagcgccaagta
attgacaaagttaccttgacggcatatgagcaactaggaggagaggatgcttctgatagc
accattcagcaaggaaagacgatcgaggaagaagaagcagaaggtgctagctacatcatc
gatggtagattgagaagagtacatccatactattttacctatttgacatattgcaagatg
agatggagggacagaaaactcttggatatatttgtagacgaatttagagatcgctcggct
gaatactacaagaaagccattgatgctggacaagtaacgttgaataaaaagccagctaac
ttggacagtatagtgagaaatggagatctcatcagtcatcgtacttatagaaaagagccc
ccagtttcatcgcgtgaaatcaaaattgtgtatgaggatgacgatttaattgcaattgat
aaaccttcaggtattccagtgcatcctacggggaggtatcggtacaatactatcaccaag
attttccagcacgaaatgggcaaagtggtacacccctgtaacagacttgatagactcact
agtggtttgatgtttcttggaaaaaccgctaaaggggcagacaaattggtcaaacagatc
agagaaagaagcgtaagaaaggagtacattgctagagtgaagggagaatttcccttggaa
gaagttgaagtcgaccagcctatgagaaccattgctcataagctaggcttgaacagaatt
gacttgaaagaaggcaaagatgctaaaactgctttcaaacgggtttcttatgatccagaa
cacgatacttcgattgtcaagtgtattccattaactggtagaactcaccaaattcgtgta
cacttacaataccttgggcatcctattgccaacgaccctatctactcgaacaagttcgta
tggggaaataatttgggaaaagacaacgaaggtgactccaatgaaataatacaacgttta
gatagaattggtaaagacaaggccgcctcttcttgggcccatcccgaggaagatggagag
ttaattactgatgaaattgatgaaatctctggaatgccagtttattccgatcctggtccc
aatgacttggacttgtggttgcatgcctataaatatgaagcagcagacaagtcgtggtcg
tacaagactgagtatcctgaatgggcaattggaccacacagaaagttcatggaattatca
ctagaaatggccaataagtgcgacgaaacgcaaactcaatacaatgtaggtgctgttttg
gtcaacagaggcaaggttcttgctacaggccactctagagaacttccaggaaacacccat
gcagaacagtgtgctttagaaaagtatttcgaagagactggaaagagagaaataccgaaa
ggaacagagatatatactacgatggaaccatgtactcttcgattaagtggaaatattccc
tgtgccgatcgtataattggtaccactatcaagacctgttttgtaggaatagtcgagcca
gacacttttgtcaagaacaattcatgttctgctaagtttgctgaaaatgggatagagtat
attcatattcctggctatgaagaggaatgtttaaagattgctacaaagggccacgagaag
ttaagcaaagactcataa
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