KEGG   Scheffersomyces stipitis: PICST_33791
Entry
PICST_33791       CDS       T01023                                 
Name
(RefSeq) Exodeoxyribonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03030  DNA replication
pic03410  Base excision repair
pic03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PICST_33791
   03410 Base excision repair
    PICST_33791
   03450 Non-homologous end-joining
    PICST_33791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pic03032]
    PICST_33791
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_33791
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pic04147]
    PICST_33791
DNA replication proteins [BR:pic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PICST_33791
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PICST_33791
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PICST_33791
Exosome [BR:pic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PICST_33791
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5 DprA_N
Other DBs
NCBI-GeneID: 4840943
NCBI-ProteinID: XP_001386488
JGI: 33791
UniProt: A3M056
LinkDB
Position
8:496033..497270
AA seq 381 aa
MGVKGLNQLIKEHSPGAFKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNESGE
TTSHLSGMFYRTIRMVENNIKPVYVFDGKPPVLKGGELEKRLLKREEAQKQIDSIKDTGT
VAEVMKFEKRLVRVSREQNDEAKKLLELMGIPYVNAPCEAEAQCAELARTGKVFAAASED
MDTLCYEPPYLLRHLTFAEARKMPINQITYSEAIAGLEMTKPQFIDMCILLGCDYCETIK
GVGPVTAYKLIKEHGSLEKIIEHINSNPTSKYKVPENWPYDEARQLFMDPEVTKGEEVTL
KWKEPDVEGLIQYMVREKGFSEDRIRSGAEKLKKGLKTGVQGRLDGFFSVVAKPGAKAGD
KKGDKKRGSDSKASNNKKKRK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgggtgtgaaaggactcaaccagctcattaaagagcattcacctggtgccttcaaggag
tttcagttgaaaaacttatttggtcgtaaagttgctatcgatgcctccatgtgcttgtac
cagttccttattgccgtcagacaatcagatgggcagcaattgaccaacgagagcggagaa
acgacatctcacttgtctggtatgttctacagaacaatccgtatggtggaaaacaatatc
aagccagtatacgtctttgacggaaaacctcctgtcttaaaaggaggcgaacttgaaaag
agattattgaaaagagaagaagctcaaaagcagattgattctatcaaggatactggaact
gtggcagaagtaatgaagtttgagaaaagacttgttagagtctccagagagcaaaatgac
gaggcaaagaagcttctagaactcatgggaataccgtacgtaaatgcgccctgtgaagcc
gaagctcaatgtgccgaattagctagaactggaaaggtgtttgcagctgcttccgaagat
atggacaccttgtgctatgaaccaccttacttgttgaggcacttgacttttgccgaagcc
agaaagatgccgatcaaccagatcacctactcggaagcaattgctgggttggaaatgaca
aaaccgcaattcatcgatatgtgtattcttcttggttgtgactactgtgaaaccatcaag
ggagtgggtcccgttacagcctacaagcttatcaaggaacatggctcattagaaaagatc
attgaacacatcaatagcaaccctacttccaagtataaagtgccagaaaactggccgtac
gatgaagccagacagttattcatggatccagaggtcacaaaaggtgaagaagtcactttg
aagtggaaagagccagatgtagaaggacttatccaatacatggtcagagaaaagggattc
agcgaagacagaatcagaagcggagcagaaaagttgaagaagggattgaaaacaggagtc
cagggaagattggatggattctttctggttgtagctaaacctggagctaaggctggagac
aagaagggtgataagaagagaggtagtgattccaaagctagtaacaacaagaagaaaaga
aagtga

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