Scheffersomyces stipitis: PICST_34257
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Entry
PICST_34257 CDS
T01023
Symbol
RPM2
Name
(RefSeq) RNase P subunit
KO
K14533
ribonuclease P protein component, mitochondrial [EC:
3.1.26.5
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_34257 (RPM2)
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_34257 (RPM2)
Enzymes [BR:
pic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
PICST_34257 (RPM2)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
PICST_34257 (RPM2)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial ribonuclease P
PICST_34257 (RPM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPM2
PPR_2
PPR_1
PPR
CspB_prodomain
TPR_19
Motif
Other DBs
NCBI-GeneID:
4851213
NCBI-ProteinID:
XP_001387463
JGI:
34257
UniProt:
A3GG14
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Position
1:<1213279..>1217268
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AA seq
1272 aa
AA seq
DB search
MVFINLIKYAKHSTNYKDSIQFFQSSYPYLNGNSYPLIRHNFFYKTNRWSNEDPHPSNRS
RNFLSISHGHYGLYYAMYNHDAQRRKEKKAQEKYIMAYILKSSRSATGADHDRSESFYGS
QCRVQLMKKTKFFISKLNQDIQSNIDELKKYTYSLLSILNAVRNFSTFCPKHRKITAETP
SLRTDTDGSFESNFLHNQIAAITSTYSSYTDASELNIIYPLYQSLKRNDLTLPSIQLYNI
VLSSIEKRALDSEFTLEAIENKLTNLLTVYQDILSSGNKPDTETYNLIIRNLLQGNLDCL
HLESSNQYQYFATYKRAQEFCQISIELFNSIKAINQLDLDCLVPKLLVVLDSFPELVTKD
LLLRLISAISEVNTLTKDTYCTLIGITKHFTKFGIFEGNSKEIYKFIVSVYSDYKQVIEN
DDNEFAIYNTLIESLVQNGQLALASEFLDEILLDYKNSFALDKKASKSQVSSLISTYIKQ
IICSGSRTSLFKGYDLLMKFNRISYIPELSISVYNNMINKFINECNSIQIEKQKLTNSNN
KSTFENTSKSQELESLQSSIYKNIWKLYDYIAIRKDFQSMPTMESIRADKFNCREVLLSL
TLEMGDHTRIFQLIKEIVVKNHLVFDLNVLKKTLNYLYNGVVYNREQGEHFNRYYLGLVW
NLVESQAQHYSSNSKDLNDFFSEFVSFLLVPVPQNSPAIPDIIDYNIQMFMNSLTLENAI
KDFNFQSDNIYGLIIASKLIMNYSGKDITIINKILSFQAQLVKLFEDSDNHYVELNAELL
SFRSELKVSFKSLLERFKDRIVFNQAILEGCKFYDIEVNSPVDPESEIEWTYDLNLSYVL
STNYDVGVSKFIEMFQKGYNFSSGTWEIIFNYNFAVDVLEANFPIKVGDFVMRFMQSNVE
HDMKVDLITKLINYNSDKINIKIVQLLLENPSMLLSGTSTDCKVLIYLIKSSEDSPNLYL
QALLNDRSFFQSIFSINHDEAWIVEYFKFLKLRGNARELTSIVEDFGIITTGSKLDSAQF
KLMYHYLMSLIESDNLAKFNTVFQETFTNQNTSYASDVEFLEMMISYNLAVKSDESLKMI
WTDFRKFQYKSQNLKELILLAELISYFRTGEIPKHSNHQVKTIEELAIRLLSSNVGEMDK
LYTKNKQLLPNKERKLQLPTVKSDDILRVSFRNVLKFLKLEGFRNVNSEVFVKMIEFLKL
IQASDILNIILTKFLHNSKITDILNFYFLEVQLFEDTDKMKVLKSLHSSFKSLGDSFNAR
VIDDYIHGQTMA
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggtattcatcaacttgataaaatatgcgaaacactctaccaactacaaggactcgatc
cagttctttcagagctcgtatccgtacctcaatgggaacagctaccctctcataagacac
aactttttctacaaaacgaacagatggtccaacgaagatccacacccttccaacagaagt
agaaatttcctcagcatctcgcacggccattatggtctctactatgccatgtataaccat
gatgcacaacgtagaaaagagaagaaagcccaggaaaaatacatcatggcttatattctt
aagagctctcgttctgctaccggtgctgatcatgatcgtagtgaaagcttctatggtagt
cagtgtcgtgttcagctcatgaagaagacgaagttttttattctgaaactcaaccaggac
atccaaagcaacatagatgagttgaagaaatatacctatagcttgctttcgattttgaat
gctgtgagaaacttttcgactttctgtcccaaacatagaaaaattaccgcagaaacacct
tcattacgaactgatacagacggttcttttgagtctaattttttgcataatcaaatcgct
gccatcacatctacgtattcgtcatacactgatgccagtgaattgaacataatttacccc
ttataccaatcattgaagagaaatgacttgacattgccttctattcaattatacaacata
gtgttgtcttccatcgagaagagagctttggattcggagttcaccttggaagccattgag
aacaagttgaccaacttgttgacggtataccaagatattctttctagtggtaacaagcct
gatacagagacatacaatttgattatcagaaatcttttgcaaggaaacttggattgcctt
cacttagaatcaagcaaccagtaccagtattttgcgacttacaagagagctcaggagttc
tgtcaaatcagtattgaattgttcaattcgatcaaagcaattaaccagttagatttggac
tgtttggttcctaagttgttggtggttttggatagctttccagaactcgttaccaaagac
ttgttgttgagattgatctcagcaatttcggaagtaaatacgcttactaaagatacctac
tgcacattgattggaataaccaagcatttcactaagtttggtatttttgaaggtaacagt
aaagaaatctacaagtttattgtatctgtctactcggactacaagcaagttattgaaaat
gacgacaatgagtttgccatttacaacacattaatagaatcattggttcaaaatggtcaa
ttagctctagccagtgaattcttggatgaaatccttttggactacaagaattcctttgcg
ttagacaaaaaggcgtccaagtctcaagtgtctagtctaatctcaacatacatcaagcag
attatctgctcgggttcgagaactagtttgtttaaaggttatgatttattgatgaaattc
aacagaattagttacattccggaattatctatttctgtgtacaacaatatgatcaacaag
tttatcaatgaatgcaattctattcaaattgaaaaacaaaagttgacaaactcgaacaac
aaatcaacttttgaaaacacttcaaagtctcaagaactcgaaagcttgcagtcctcaatc
tacaagaatatttggaaattgtacgactatattgcaattagaaaagatttccaatcaatg
cctacaatggagtccatcagagctgataagttcaattgccgtgaagttttgctttctttg
actttagaaatgggcgatcatacaagaatttttcaattgatcaaagaaatcgtcgtcaaa
aaccaccttgtctttgacttgaatgtcctcaagaaaaccttgaactatttgtacaatgga
gttgtatacaatagagaacaaggtgaacacttcaaccgctattacttgggattggtttgg
aatttggtagaatcgcaggctcaacactatctgtcaaacagcaaagatttgaacgacttc
ttctctgaatttgtgagtttcttgctagttcctgtgcctcaaaattccccagctattcca
gatattattgattataatatccaaatgtttatgaattctttgactttagaaaacgccata
aaagattttaatttccaatcggataacatctatggcttaattatagcgtcgaagcttatc
atgaattacagcggcaaggatatcaccatcatcaacaagattttactgttccaagctcaa
cttgtcaaattgttcgaagattctgacaaccattacgtcgagttgaatgcagaacttctt
ctgtttagactggaattgaaagtttctttcaagtccttgttggaaagattcaaagatcga
atcgtattcaaccaagccatattagaagggtgtaaattttatgacattgaggtcaacagt
cctgtggatccagagagtgaaattgagtggacatacgatctcaatttgagttatgtatta
tccactaactatgatgtcggagtttctaagtttattgaaatgttccagaaaggatacaat
ttcagtagtggaacatgggaaatcatcttcaattacaattttgctgttgatgttcttgag
gcaaactttccaatcaaagttggagattttgtcatgagatttatgcagctgaatgttgaa
catgacatgaaagttgacttgataacgaagttgatcaactacaacagcgacaagatcaac
atcaagattgtacagttgctacttgagaatccttctatgttgctcagtggaacatcaact
gattgtaaggttttgatttacttgataaagtcatcagaagattcaccaaacttgtacttg
caagcattgctcaatgatcgttctttttttcaactgattttcagtatcaatcatgatgag
gcttggatagttgaatacttcaaatttttgaaacttcgaggtaatgcaagagagctcacc
tcgattgttgaagatttcggtattataactactggaagcaagcttgactcagctcagttc
aaactcatgtatcactatttgatgtccttaatcgagtctgataatttggcaaagttcaat
actgttttccaggagactttcacaaaccaaaatacttcatacgccagcgacgttgagttt
ttggaaatgatgatcagctacaatttggcagtgaagtccgatgaaagtctcaagatgatt
tggactgacttcagaaaatttcagtacaagtcgcaaaatttgaaagagctcatcttgttg
gcagaactaattctgtattttagaactggtgaaattccaaagcattctaaccaccaggtt
aagactattgaagagcttgcaattaggctcttgtcttctaacgttggtgaaatggataag
ttgtacacgaaaaacaagcaattgcttccgaataaggaaagaaagttgcagttgcctact
gtcaaaagcgacgacatcttgagagtttcgttcagaaatgtgctcaaattcttgaagctt
gaagggttcagaaacgtcaacagtgaagtttttgtgaagatgatcgaattcttgaagttg
atacaagccagtgatatcttgaatatcatattgacgaagtttttgcacaacagcaaaatt
accgacattttgaacttttactttttggaagttcagttgtttgaagatactgacaaaatg
aaggtattgaagtctctccatagtagcttcaagctgttgggagactcatttaatgctcgt
gttatagacgactatattcacggtcaaaccatggcctag
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