Scheffersomyces stipitis: PICST_34582
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Entry
PICST_34582 CDS
T01023
Symbol
NUP85
Name
(RefSeq) Protein in nuclear pore complex may function in nuclear envelope integrity may also be involved in tRNA biogenesis
KO
K14304
nuclear pore complex protein Nup85
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_34582 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_34582 (NUP85)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_34582 (NUP85)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_34582 (NUP85)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PICST_34582 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Menin
Motif
Other DBs
NCBI-GeneID:
4851751
NCBI-ProteinID:
XP_001386855
JGI:
34582
UniProt:
A3GHK2
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All DBs
Position
1:2742566..2744854
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AA seq
762 aa
AA seq
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MSDNFERNFDDIEMLEIPDDESTSETEAISDSSSNNSTKVADRSLYSQEKSYVDLQEWLD
STIPLEFKFDKKQYDQTVGISDSYSQNYVKYVNSLYKLIEGISKSDITRIELEKEDAPIG
FTEIDDVNSTRIDRDSVYKDIDSAFGSIVESLGVFLAEIADEETVDESYLLQLHSLLYIL
QCLQSNYFVSDVKLKPELLAKWVNGFYHKPTNELTEAVMINTPTPYTHPQFWNTYLSQLV
SRGLLSQAVEAITHSQYEQLEAEVPELYSVISDLVLLLGNYEPLCLKGSFSEWKLAACEF
RDSLAKVSVESENPQHTIMLSQIYDVASIMTGLSKTIAAHCETWYEVYVALALYKIRDDN
ELYKEFYNIAISEIPPASFEVDTSDMSQICEDCFKNILDENFLKVIKTMHDIEPATASYV
SKLLELRSYLTNYYSVASNSKDIDALLNKRTISEYFLTRHAFECLNIHSLVPVGIGLLLN
GDIAISEQSKTHNRNVIKDFLPHFKSLTNDDLEWALTICAQLNLLSTARELYYISGLKSL
NDGYIFEALNMFVNCYDPTSIEEDGKSDGIKQVHRIVWDMIFQDSLVNNRPVEDDLINNI
VTNNVDKSLKIHPVIRQCLSPYAVLHDFFAHLESDDLSSAKKFSKLIHILKFNYLPKKFC
PLLLCQYLPFLNDTNSVFQLPDLIVVIDVIDSFYSQATAEELKEGESLYQYSINHIEDVT
EPYDWRVTLQKKNIDIPTNLKELSKTIRNAIVAKIGKVYMET
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaattttgagagaaatttcgacgacatcgagatgttggaaattccagatgat
gaatcgacctccgagaccgaagccatttctgattcatcgtccaataactccacgaaagtc
gcagacaggctgttatattcgcaagagaagtcgtatgtggatcttcaagaatggcttgac
tcgacaataccgcttgagttcaagtttgacaagaagcagtatgaccaaacggtaggaatc
agcgattcctactcacagaactatgtcaaatatgtcaactctctctataaattgatagaa
ggaatcagcaaaagcgatattaccagaatagaattagaaaaggaagacgctcctatcgga
tttacagagatagacgacgtgaattccactagaatcgacagagattcggtttataaagat
atcgattctgcttttggctccattgtcgagagtcttggggttttccttgcagaaattgcg
gacgaagaaacagtcgatgagtcgtacttgcttcaattacatagtttgctatacatttta
caatgtttgcaatccaactactttgttagtgatgtcaaactcaagccagaattactagct
aagtgggtcaatggattctaccataaacccaccaacgagttgacagaagctgtcatgata
aatacgccgactccctacacacatccacaattctggaacacgtacttgagccagcttgtg
tcacggggtctcctttcgcaggctgtagaagccattactcattctcagtatgagcaattg
gaagcagaagttcctgaattgtactccgtgatttccgaccttgtactcttattaggtaac
tacgagcctttatgcctaaagggtctgttttccgaatggaagcttgctgcctgtgaattc
agagattcgttggccaaggtatcagtagagtctgagaatccccagcatacaatcatgctt
agccagatctatgatgttgcttctattatgactggtttgtccaagactatcgcagcccac
tgcgaaacttggtatgaagtctatgttgctcttgcgttgtacaaaatcagggatgacaat
gagctctacaaggaattctacaatatagctatactggaaataccacctgcctcttttgaa
gtagacacctctgacatgtcgcaaatatgtgaagactgtttcaaaaacatcctcgacgaa
aacttcttgaaggtgataaagactatgcatgacatcgagcctgccacggcatcgtatgtt
tccaagttgttggagttgcgatcttatttgaccaactactactccgtagccagcaactct
aaggacattgatgctttgctcaacaaaagaaccatttcggagtactttttgaccagacac
gcgttcgaatgcttgaatatccacagcttagttcccgtaggcataggtttgttgttgaat
ggagacattgctatttcagagcaatccaagactcacaaccgtaatgtcataaaggacttc
cttcctcatttcaagtctttaaccaacgatgacttggaatgggctctaacaatttgtgct
cagttgaacttgttatccactgcaagggagttgtactatattagtggcttgaagtcgttg
aacgacgggtatatcttcgaagcattgaacatgtttgtcaactgttacgaccctacttct
atagaagaagacggcaagagtgatggtataaaacaggtacatcgtattgtgtgggatatg
attttccaagacagtttggtcaacaacaggcctgtggaggatgatttgatcaataatatt
gtcactaacaatgttgacaagtcgttgaagatacatccagtgatcagacaatgtttgtcg
ccgtatgctgttttgcacgacttctttgctcatcttgagtccgacgatttatctctggca
aagaagttctccaagttgattcatatcttgaagttcaactacttgcccaagaagttctgt
ccgttgttgctctgtcaatatcttccttttttgaatgacaccaactctgttttccaactt
ccagacttgattgtcgttattgacgtcattgacagcttctactcgcaggctactgctgaa
gagttgaaggaaggcgaatcattgtaccaatattccataaaccatatcgaagatgtaacg
gagccatatgactggagagtaaccctacagaagaagaatattgacatcccaaccaatctc
aaagaactttctaagacgataagaaacgctatcgtagccaagattggaaaagtatatatg
gagacttag
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