Scheffersomyces stipitis: PICST_34970
Help
Entry
PICST_34970 CDS
T01023
Name
(RefSeq) predicted protein
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic04130
SNARE interactions in vesicular transport
pic04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PICST_34970
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PICST_34970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_34970
Membrane trafficking [BR:
pic04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
PICST_34970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
DUF4407
NTPase_P4
Dodecin
Spectrin_SESTD1
Sec20
YqjK
Fib_alpha
DUF2730
Motif
Other DBs
NCBI-GeneID:
4836976
NCBI-ProteinID:
XP_001382953
JGI:
34970
UniProt:
A3LNU7
LinkDB
All DBs
Position
2:complement(949771..950598)
Genome browser
AA seq
219 aa
AA seq
DB search
MSDLFETYESDFQLALSEAKSKLAQISAVEGESRKSYLRAIEGAIEEGQEVLDQMGIEVQ
NLPTNQRSSYNTKIRQYKSQIDDSKSRLNQLLNSQDKHELFGSRYTDDVEPGSLQDQQRK
TLLGNNASLERSSQRLKDSHRVALETESIGGNILNDLRSQRDQISGARNTLMTADTYVDK
SIQTLKSMSRRLTANKFISYAIIAVLILLIFLVLASKFW
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcttttcgaaacgtacgaatccgatttccagttggcgttactggaagccaag
tccaaattggcacagatttcggctgttgagggggaatccagaaaaagctacttaagagct
atagaaggtgctattgaagagggccaggaggtgttggaccaaatgggtatagaagttcag
aacttgcccactaatcagagatcatcgtataacaccaagatacgtcagtataagtcacag
atagacgacagcaagagccggttgaaccagttattgaattctcaggacaaacacgaattg
tttggtagcagatacactgacgatgtagaacctggaagtttgcaggatcaacaaagaaag
actcttttgggcaataatgcatcgcttgagaggtcgtctcaaagattaaaggactctcac
agagtggctcttgaaaccgagtcgatcggaggtaacattctcaacgacttgagatcacaa
agagaccagatctctggagctagaaatacgcttatgactgctgacacttatgtagacaag
tcgatccaaaccttgaagtctatgagtcgtcgtttgacggccaacaagtttataagttac
gccattattgctgtgttgatcttgctcatcttcttagtgttggccagcaagttctggtga
DBGET
integrated database retrieval system