Scheffersomyces stipitis: PICST_35815
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Entry
PICST_35815 CDS
T01023
Name
(RefSeq) predicted protein
KO
K10754
replication factor C subunit 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03030
DNA replication
pic03410
Base excision repair
pic03420
Nucleotide excision repair
pic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PICST_35815
03410 Base excision repair
PICST_35815
03420 Nucleotide excision repair
PICST_35815
03430 Mismatch repair
PICST_35815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pic03032
]
PICST_35815
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_35815
DNA replication proteins [BR:
pic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PICST_35815
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PICST_35815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_16
RuvB_N
AAA_22
nSTAND3
RNA_helicase
AAA_assoc_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
4838820
NCBI-ProteinID:
XP_001384033
JGI:
35815
UniProt:
A3LT44
LinkDB
All DBs
Position
4:403279..405573
Genome browser
AA seq
764 aa
AA seq
DB search
MTAEQVLSTIPDADLPEDVEDKKFNFFAKKAADASTGTGESVQIPEAQPNCLSGLTIVFT
GVLPRLDRDTSENLAKRYGAKVTKSISGKTSLVVIGDEAGPSKIKKIKSLHIKAINEDGF
IQLLQSMPMEGGDGAAAQKAKLKREEEERKIVEEAEEEERRAQEEEARQKRLLEARKAAS
IEKASHSQSSHREPAEVPRIIPDSEKLWTVKYAPSRIDQLCGNKGQVQKLQNWLSNWFDN
AKKDFKVPGRDGSGIYRACLISGPPGIGKTSAAHLVAKSLGFDILEKNASDVRSKSLLNS
NLKSVLTNTSVVGFFKHRDENIQHTQNDRRFCLIMDEVDGMSSGDHGGAGALSAFCKITH
MPMILICNDKSLPKMRTFDRVTLDLPFRRPSEAEMKSRLMSIALREKIKLDPTVIGQLVQ
ATGNDIRQIINLLSTVSKTQSSIGGEQAKDAANSWKKQTVLKPFDITARLLNAQIYSPNA
KHSLNDKIDLYFNDIDFAPLMIQENYLSTRPSDARTPQDHLRRVANAADDISESDRINSL
IRSSEQQWSLLPFHGVMSSVKPSSQVAGQISQRINFAGWLGQNSKAMKYQRMLQDLQYHT
RLRTSTDKKELRLDYLPTLRQRLTEPLLQGEEQGIQPVIDIMDYYYLTKEDWDNIVDLGV
GRYKGELVLKGISTKTKSAFTRSYNSTTHPIAIYKTGNSVGAMVSSKKNVDYEDVIEDDT
NTPDKDDEEVDPDKIDSKKDKLIKEVKPKKTARKAKAAPKGRKK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagaacaagttttgtccacaattccggatgcagacttgccagaggatgtagaa
gataagaagttcaacttctttgccaaaaaggcagccgacgcgtcaactggcactggcgaa
ctggttcaaattccagaagctcaaccaaactgcttatctggtttaactattgtgttcact
ggtgtgttgcccagattagatagagatacttccgaaaatttggccaagaggtacggcgcc
aaagttacaaagtctatttctggtaagacgagtttagtagttataggagatgaagctggt
ccatccaagatcaaaaagataaaactgttgcatataaaagccataaacgaagatgggttc
atacagcttttgcagagtatgccaatggaaggaggagatggagcagccgctcagaaggct
aaattgaaaagagaagaagaggaacgtaaaatcgtagaagaagccgaagaagaagaacgt
agggcccaagaggaggaagccagacagaaaaggcttttggaagcacgaaaagctgcctca
attgaaaaggcctcgcattcacaatcttctcacagagagccagcagaagttcccagaatc
atacctgacagcgaaaagttgtggactgttaagtatgctcccagcaggattgaccagctt
tgtggaaacaaaggacaagttcagaaattgcaaaactggctttccaactggttcgacaac
gctaagaaggatttcaaggttcctggaagagatggcagtggtatttaccgagcttgctta
ataagtggtccaccgggtattggtaagactagtgcagcgcatttggttgcaaaatcgttg
ggatttgacatcttggagaagaatgcctcagatgtcagatccaagtctttattgaactcc
aatctcaagtccgtgttaacaaacacttcagttgtggggtttttcaagcatcgcgatgaa
aacattcaacacactcagaatgatcgtagattctgccttattatggatgaagtggatgga
atgtctagtggtgatcacggaggtgctggggcgttatcggctttttgtaaaatcacacat
atgcctatgatcttgatttgtaacgataagtcgttgcccaagatgaggacatttgatcgt
gttacgttggacttacctttcagaagaccttccgaagctgagatgaagtccagattgatg
tctattgctttacgagaaaagatcaaattggatcccacagttattgggcagttagtccag
gctacagggaacgatatcagacagatcattaacttgttgtctacagtttccaagactcag
tcgagtataggcggagaacaagccaaggacgcagccaatagctggaaaaagcaaacagtt
ttgaagccgtttgatatcacagcaagattgttgaatgctcaaatctactctcctaatgca
aagcattccttgaacgacaagattgatttgtatttcaacgatattgatttcgctccgctt
atgattcaagaaaactacttgctgacacggccatccgacgctagaaccccacaggaccat
ctaagaagagttgcaaatgctgccgacgacatttctgagtctgaccggatcaactctctc
atcagatcgagtgagcagcagtggagtttgttaccattccatggtgttatgtcatctgtc
aagccttcttcgcaagtggcaggccagatttcgcaacgtatcaactttgctggatggttg
ggacaaaattcgaaagccatgaagtaccagcggatgttgcaggacttgcagtaccatact
cgcttaagaacttctacagacaagaaggagttacgcttggactacttgcctacacttcgt
caacggttgactgagccattgttacaaggcgaagagcaagggatccagccagtgatcgac
atcatggactactactacttgactaaagaagattgggacaatattgtagatttgggtgta
ggcaggtacaagggagagttggtgttgaagggtatcagcaccaaaaccaagtccgcgttc
actagaagctacaatagcacgacgcatcctattgctatctacaagacgggtaattctgtg
ggagccatggtatcgtccaagaagaatgtggactacgaagatgtgattgaagatgacaca
aacactcccgataaggacgatgaagaagttgatcccgataagatcgacagcaaaaaggac
aaattgatcaaggaggtgaagcccaagaagacggccaggaaagccaaggcggcacccaaa
ggtcgcaagaagtga
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