KEGG   Scheffersomyces stipitis: PICST_36313
Entry
PICST_36313       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
pic  Scheffersomyces stipitis
Pathway
pic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PICST_36313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pic03041]
    PICST_36313
   04121 Ubiquitin system [BR:pic04121]
    PICST_36313
Spliceosome [BR:pic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    PICST_36313
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    PICST_36313
Ubiquitin system [BR:pic04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PICST_36313
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 4839115
NCBI-ProteinID: XP_001385172
JGI: 36313
UniProt: A3LVL6
LinkDB
Position
5:complement(847882..849873)
AA seq 641 aa
MTEEISLSVEDTNKLRLQLGLKPISLQQEDSSPIYELSIEETNKLRLSLGLKPLDSEISK
GSEQAVEVQNFNNHQEQKRRQHNDEKLKNRISDKRQENRNNKRLIQVSEQSRNEEPVDTD
NWLANLGKPKTKKAKTSVAKTTQQDSSQVKIAHSEKELKNLHNNDILTLEDADILDENDD
EVDVLTNQKLVDSSKLKKDLKQQAEEENIKFNGRHYQGRYDEDDSEDEKEVQGVMITTGS
VIKLDNISKKESVKKDNRVTISNLFDESEDEGIFESNDFSKPKKPVKMKKMKKSKLSTSS
NSRVRDDDIPTVKAVELETFAEDLVDEEDDLQSKLTTRRRLKQKTERSSLTPDQIASEIA
RNKRWDLEAVAEENIAGAALGGEAIVFNDTTEFLSSIDVNGVNLKPDPESQAEPEISSEP
PKMEEKGFAIKKENVSYSATSVTVKKEDDDNEIAEVAESDSGPKFNGGLAETLNFLQSRN
ILHKSSAGEHDQERKRREAARESELLKIKISIEERLLKEELESSREYMNLPKTERSEIFD
RALDQRLKEKNIVQDVPATRGGARGRKYRGHIGKDEGKLAGYNPKVKLSYRDNNGDELNT
KEAFKYLSHQFHGVGPSIGKEEKRKKKHLEEKEHTTEARIV
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgaccgaggagatatcgctttcagtagaggacacaaacaaactccgactccagcttgga
ttgaagcccatatcgcttcagcaggaagattcttctccaatttacgagttatccatcgaa
gagaccaataaactacgacttctgttgggcttgaagcctttggattctgaaataagcaag
gggctggagcaagctgttgaagtccagaatttcaacaatcatcaagaacaaaaaagacga
cagcacaatgatgaaaaactaaagaatagaatttcagacaaaagacaggagaacagaaac
aacaagaggttaattcaagttagtgaacaactgcgcaacgaagaaccagtggacacagac
aattggttagccaatttaggcaagcccaagactaagaaagcaaaaacttctgtggccaag
acaactcagcaagactcatcacaagtgaaaatagcacattctgaaaaggagttgaagaac
ttacataacaacgatatcctcactttggaagacgccgatattctcgatgaaaacgatgac
gaggtcgatgtcttaactaaccaaaaacttgtagacagttccaagttgaagaaagacttg
aaacagcaagctgaagaagagaatataaaatttaatggacggcactaccagggaagatat
gatgaggatgacagtgaggacgaaaaagaagtccaaggtgtgatgattactacaggcagt
gtaattaagcttgataacatttcgaaaaaggaatctgtaaagaaagataacagagtcacg
attagtaatctttttgacgagtcggaagatgaagggatctttgagtcgaacgacttttca
aagcccaagaagcctgttaaaatgaagaaaatgaaaaagagtaaactactgactagtagc
aactccagagttagagatgacgatatccctacagttaaagctgtggagttggaaactttt
gcagaagatcttgtagatgaagaagacgatttgcagagtaaattgactacacgtcggcgt
ttgaaacagaaaacggaacgctccagtttaaccccggatcaaattgcgagtgaaatagct
agaaacaagagatgggatttggaagcagtagcagaagaaaatatcgctggagctgcattg
ggaggggaagcgatcgtattcaatgatacgactgaattcttgagttcaattgatgtaaat
ggagtcaatttgaaaccagaccccgagagccaggcagaacccgaaattctgtcagagccc
ccgaaaatggaagagaagggatttgctattaaaaaagaaaatgtcagttactcagcaact
agcgtcactgttaagaaagaagacgatgacaacgagattgcggaagttgcggagtcggat
tctggccctaagtttaacggtggtttagctgagactctcaattttttgcaatcacgaaat
attttgcacaagtccagtgctggagagcatgatcaggaaaggaagcgtagagaggccgct
cgagagtcagaattgctcaagattaagatctcgatcgaagagcgtctactcaaggaggag
ctcgagagcagcagagagtatatgaatcttcccaagacagagcgaagtgaaatctttgat
agagcacttgaccaacgtttgaaggagaagaacatagtacaggatgtaccagctactaga
ggcggtgctagaggaagaaagtacagaggccatattggcaaggatgagggcaagttggct
gggtacaatccaaaggtaaagctttcgtacagggacaataacggagacgaactcaacaca
aaggaagcgtttaagtacttgtcgcatcaattccatggtgttggtccaagtataggcaaa
gaagagaaacggaagaagaagcatttggaggagaaagaacatactacagaagctcggata
gtgtag

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