Scheffersomyces stipitis: PICST_36619
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Entry
PICST_36619 CDS
T01023
Symbol
VPS27
Name
(RefSeq) vacuolar protein sorting-associated protein hydrophilic protein
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
pic
Scheffersomyces stipitis
Pathway
pic03250
Viral life cycle - HIV-1
pic04144
Endocytosis
pic04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PICST_36619 (VPS27)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PICST_36619 (VPS27)
04145 Phagocytosis
PICST_36619 (VPS27)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_36619 (VPS27)
Membrane trafficking [BR:
pic04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
PICST_36619 (VPS27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
UIM
Vps27_GAT-like
UIM_2
RAP80_UIM
ThiD2
Motif
Other DBs
NCBI-GeneID:
4839973
NCBI-ProteinID:
XP_001385783
JGI:
36619
UniProt:
A3LX75
LinkDB
All DBs
Position
6:complement(<490270..>492723)
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AA seq
732 aa
AA seq
DB search
MSWFGSSSDSTIELDNKIQEATSESIPNGELDLPLALEVTDLIRSKSLPPIQCMRSLKKR
LGMTYSNPNLLSSTLKLVDLCIKNCGSHFLNEIASKEFMDYLVDFIFKVHYDTKNYQVRN
SEAKMNVGELILSLIKEWSILFSNSSDLSYVTRCFERLESEAYNFPDFAETSALNSKFVD
TEVPPDWVDDDKCMICYDKFSMINRKHHCRACGGVFCQTHSSNFIPLVSLGISKPVRACD
NCLAKQKSKNKPSQHNSSSHSRGTSRVQEDDEDEMLRKAIELSLQDTQIPVSAPVARDAP
TNSSQTKTITDEDDDEDLKAAIAASMKDYQDQERLREEQQKQWQQEQEEKHHQEEQSDFY
NYSIPKPSNYSQQLPYVQSVASLTEEEEADINKFITLMYQVKNDQNISYARLHDEKLTDL
HTKVCPLRSKVTKNLIYTVERQKAFTELNNKIAAITRLYEEHLDSKLKQTYGYQQSVPPV
QLPEINDYMRGPQSNYEQSIPAQGTGYQQQAGYVHPETTGYPSYPGGQQPIPQQPIAQQP
SGSRPSAQQAQKAPEQKHEQQQTSVPTFAYPPQESYPPEGEDDEEQSNFELPPLPNQAQN
DFSYPPTQSYDSPSEPMYPNDSTDQQYNVYPPNGAGSEESKDEYSSGELQPVQPTREHVL
RTRSSELPPHAVEQASARFPPIDTVEEEYQNSNNSSVPYPDVSFPIAPTQNLQPQQEPPK
KFVPEPEPLIDI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtttggcagttcctctgattctaccatagaattggacaacaagatccaagaa
gcaacttctgagtcgattcctaatggagaattggatttgccattagctttggaggtgact
gatttgattagaagtaaactgttgcctcctatccagtgtatgcgatcgttgaagaagcgg
ttgggtatgacatattccaacccgaatttgttatcttcaacactcaagttggtcgacttg
tgtattaagaactgtggttctcattttttgaatgaaattgcatccaaggagttcatggac
tatcttgtagacttcatatttaaggtacactacgacaccaagaactaccaggtgcgcaat
ctggaagccaagatgaacgtgggtgagctcatattgtcgctcatcaaggaatggtccatt
ttattttcgaatctgtcagatttaagctacgtcacaagatgtttcgagcgtttggaaagt
gaagcgtacaactttccagactttgctgagacgtctgctttgaacagtaagttcgtagac
acagaagttccccctgattgggttgatgatgataagtgtatgatctgctacgataaattc
tcgatgatcaacagaaaacatcattgtcgtgcctgtggcggagttttctgtcagactcat
tcaagtaacttcattccgttagtttctttgggcattctgaagcctgtcagagcctgtgat
aactgtcttgccaaacagaaactgaagaacaagccatcacaacataattcatcatctcat
tcaagaggtacatcgcgtgttcaagaagatgatgaagatgaaatgttgcgaaaggcaata
gaattgagtttgcaagacactcaaattcctgtttccgctccagttgcacgagatgctcca
acaaattccagtcaaacaaagaccataaccgacgaagacgacgatgaagacttgaaggct
gccatagctgccagtatgaaggattaccaggatcaggagagattgagagaggaacagcag
aagcaatggcaacaagaacaagaggaaaaacatcaccaagaagagcaatcagatttctac
aactacagcattcccaagcccagcaattatagccaacaacttccttatgtgcagctggta
gctagtttgaccgaggaagaagaagcagatatcaacaagttcattacgttaatgtaccaa
gtgaagaacgaccagaacattctgtatgctcgtctccacgatgagaagttgactgatttg
cacaccaaagtttgtccattgagaagtaaagtaaccaagaatttgatctatactgtagaa
agacagaaggcctttacagaattaaacaacaagatcgcagctatcacgagattgtatgaa
gaacaccttgattccaagttaaagcaaacatatggctaccagcaatcagtaccacctgtt
caacttcctgagatcaacgattatatgcgtggacctcagctgaactacgagcagtctatc
ccagctcaaggaactggatatcaacaacaggctggttatgttcatcctgagactacaggc
tatccatcttatcctgggggccagcagccaattcctcaacagcctattgctcagcaacct
agtggatctcggccctctgcacaacaggcacagaaagctccggaacagaaacacgaacaa
cagcagacttcagtaccaacctttgcttatccacctcaagagctgtaccctcctgaaggg
gaagatgacgaggagcaatcaaattttgaacttcctcctttacctaaccaggctcagaat
gattttctgtatccaccaactcaatcttatgattccccatcagaacccatgtatcctaat
gacctgacagaccagcagtataatgtgtatccaccaaatggggcaggatctgaagagtcg
aaggatgaatacagttctggtgaattacaaccagttcaaccaaccagagagcatgttctt
agaacaagatcatcggaattgcccccacatgctgtagaacaagcaagtgccagattccca
cctattgatactgtagaagaagaataccaaaacagtaacaatagtagtgttccttaccca
gatgtttctttccctatagcacctacacagaacttgcaaccacagcaagaaccaccaaag
aagtttgtgcccgagcctgaacctttgatagatatatag
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