Scheffersomyces stipitis: PICST_36788
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Entry
PICST_36788 CDS
T01023
Name
(RefSeq) conserved hypothetical protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_36788
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PICST_36788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
4839869
NCBI-ProteinID:
XP_001385941
JGI:
36788
UniProt:
A3LY40
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Position
6:complement(1279879..1281231)
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AA seq
450 aa
AA seq
DB search
MSSHDEYSSDEEELVDKNQKSDVLLGFVDAPIVEEEDENDDESDLPTIEDTFIGSKPLWL
HPESIPDEKLVTCDNCGKKMALLLQAYSPLDGKLYDRVLYIFGCKNTAQCSKKKGSIKAF
RGISKDAERIAQIKQEQDEAVQKDLDEKLQLDNKKKFNIELTKDLFSTDKSTTNSSKASN
PFGSSTGSNPFASSTSQNPFAPKQSPFDANPFGKKEEPKKEEKPAKQSYAEIASKNIPKK
KGKSNKSQYELPAYAGSFLYVDKETFKKEAADPELEKYKHLIDMDVNKEDGQGSGSRRDS
TSSVSASGIDPNRAKISNMLDDKYFENFSNTVKHNPGQVLRYNLGGTPLLYSGRDDIAKK
FLGGAFNVPKPGFNPSSERQFEIQLMPKAIIDLENIKDDEVNIADILNGMSWGTIIVCTD
VEDYVPEDSLDSNRVAYIEEWCGVQWEESV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacatgacgaatactcctctgacgaggaagagttggtagacaagaaccagaaa
tcagacgttcttttgggatttgtagatgctcccatagttgaagaagaagatgaaaatgac
gatgaactggaccttcccacaatcgaagacactttcattggaagcaaaccgttatggctc
catccagaatcgattccagatgagaaattggtgacttgcgacaattgtggaaagaaaatg
gctcttttgctccaggcatactctcccttagatggaaagttgtacgacagagtgctttat
atatttggatgtaagaacacggcccaatgctccaagaagaaaggatcgataaaagcattc
aggggtatttccaaagatgcggaaagaattgctcaaattaaacaagaacaagacgaagct
gttcagaaggatttggatgagaaattacaacttgacaacaaaaagaagttcaatatcgaa
ttgaccaaggacctcttttcaactgacaagagcacaaccaattcgagcaaagcatccaac
ccatttggttcttctacagggtcgaatcctttcgcttcttccacctcacaaaaccctttt
gctcccaaacaaagtccttttgatgccaatccatttggaaagaaagaagaaccaaaaaag
gaagaaaaaccagcaaaacaatcgtatgctgaaattgcttccaaaaatataccaaagaaa
aaaggaaagtcaaacaagtcccaatacgaacttccagcatacgctggtagctttttatat
gtagacaaggaaacgttcaagaaagaggctgctgacccggaattggaaaaatacaagcat
ttgatagatatggacgttaacaaggaagatggccaaggaagcggcagcagaagagactca
acgtcgtctgtttctgcgtcaggtatagaccccaacagagccaagatctccaacatgttg
gacgataagtatttcgaaaacttctctaataccgtcaagcataacccaggacaagtattg
agatacaatctcggcggtacacccttgttgtacagtggcagagacgatatagctaagaag
tttttgggtggagctttcaacgtgcctaagccaggattcaacccatcttcagaacgccag
tttgaaatacagttgatgcctaaagccattattgacttagagaacatcaaagatgacgaa
gtcaacattgctgatatcctcaacggtatgtcatggggtactattattgtttgcactgat
gtcgaggactatgttccagaagattcgctcgattccaaccgtgtggcatacatcgaggaa
tggtgtggagttcaatgggaagaaagtgtttag
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