Scheffersomyces stipitis: PICST_36839
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Entry
PICST_36839 CDS
T01023
Name
(RefSeq) hypothetical protein
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_36839
Enzymes [BR:
pic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PICST_36839
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PICST_36839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ferritin_C144_05
SNF2-rel_dom
zf-RING_2
Helicase_C
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
Prok-RING_4
zf-RING_4
zf-P11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
4840157
NCBI-ProteinID:
XP_001385990
JGI:
36839
UniProt:
A3LYC9
LinkDB
All DBs
Position
6:complement(<1498279..>1503600)
Genome browser
AA seq
1761 aa
AA seq
DB search
MDTSRFQLIHFDLQAISRVATAEASATPKVHKKRKLTLRNRDLAIDNLKYQDVMESEQLL
RSQQLENGEDTEVVTIVDRTMKFENQDESLFLHSQFLSKMNEVANGVYEYVSDEMKLLFS
GEQQLLMVKNKKIDKLPSRLLLSVNIAQSLENETLKSEVYLLNLSNLTQLKNNLSSSKPI
VGLLFNTKTYTIEVSIHYKIQLTSNLYRNCQTEVIRNIRMLMANIAQPCPTDNEPHNLVH
KYSNRESVTSGLFYRSISENTEQLPRIEEDFDIPELETNLIRFQKKTVNWILEKENVKFN
FHSNRCTKVPLIDDSAIELITSSLRNEPTDNDKLDTLLYTIMNKLCFGWKRISLNNEKYF
FNAYTAHLASRKSVCKYLHSYYNDSDKLMCPKYLPAQALLSEEMGLGKTVEMTALMLMNK
RSIEEVNEPLRVQLHTFGEVKTIIKAKTTLVIAPDSILKQWVEEIVHLAPSLAVTIYQGV
GKYPKLDNNAVLIAEYLRKFDVVFTTYAVISRELDYALYSSRGKNTRNATKKRTQSEHFE
ETSAGDIIPSSSTENDIVVQDEQALLSDYKSLFQLAITSKKPKIANVRSSDSNETDYEMA
LQDEIALAIRHNRLPEIYKKVDYESPLMLSQFWRVVLDEVQMVSSTISRAFQSAALIPRY
HSWGVSGTPIKKNLGDLHSVLHFLRYQPFCGDVGKLSWDYITDVVNNTNDDFVKLWTTIA
IRHTKAMTHDDIQLPPQSRVLLTIPFTPIEQDFYNEKLEECLAAICLDVNGNPISNDWEP
SPTIMTYMRTWLMRLRQICCNPQIGNLNLGSRKYKKNYAYNRTFGAIQQLKTLENLLDDM
LTKAYNEIVEIEKSIISLYLDMGEFYEFIYNPKEALLFLTVGVDETEKIIHRLKLILEKY
IKDYRSQSRKLDLQNSDEKDEDIGRIDERGTPELAIVKDEVLEKLEEKIKSTRIRMRNWN
IILHRFYFLIASSYFQQYDKEYMEIMSKSQVSQRDIHSLEEVKKMMHYEEGSRADELASL
VNGVAPEDFVFTKKPIMTEYVQEADIKESEIEEAKLKFLESKYYDLAEATRGEILRGSIS
SVENAVKTRISTRGRYYDGPGEFVDNGTTLIPRNSKKFFMVIPIIETDYFVDYSIFFKIK
LFVDKLNRLILELNTQANTINNWMQNLVSILCTPLLTSDKNPVGNEYEETIQDQDKVSCY
LFVLSQVLTDRSEFVNGAENSTKIVSIKKAQEKKEADLELQKINDESFLIGLTEAREQIR
PRVKSSLQELVLSIKTIEAELKDEEQNDPERTRIQLELLGSLGERIRTVFENQKLSMILL
QKELNVNCNAVFNCRIDYYKQLQQISDTVQTSDFHMNREELVISKIMTKLVSYGSLHKHL
KFKMDKSVAKFRYLRGLTGSDEDIINKDEDEALMCIICRSTITIGSLTQCGHKYCKDCLE
QWLRNSHSCPMCKSVITTSSVYNFTHHKPDLKANKVEDANTVDKNNNILYSIYKPISKDI
IDEIQSIKLKQSYSSKVNMIVKQSLYIRSQNPDAQIVVFSQWQDMLYILGTAFKAADISY
LGSYGTLTPDIGGGRRIKKYDSVETFKDPRNKITCFLLNAKAQASGLTLINATHIFLCEP
LVNTSLELQAISRIHRIGQTKPTTVWMFAIENTVEESIVIMSTGKRLEYMKQQSSTPETL
ENDNQTASSSTSASALIAKSKEINLSKAESMALMNSGGIDTMINKGMAQGEAVTNFDLWS
AFFSARTQSRPLEQLQDSKVT
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcaagattccagcttatccattttgatttacaagccatttcacgagtcgcc
acagccgaggcactggctacacctaaggttcacaagaaaagaaagctaacgcttcgcaac
agggaccttgctatagataatttgaagtaccaggatgtaatggagtctgagcagttactt
cgcagtcaacagcttgaaaacggggaagatacggaagtcgtaactattgtagatcgcact
atgaagtttgagaaccaagacgagctgctcttcttacatagccagtttctttccaaaatg
aacgaagtcgctaatggtgtatatgagtatgttctggacgagatgaagcttcttttcagt
ggagagcagcagttgttgatggtgaaaaacaagaaaatcgacaagctaccactgcgacta
cttctttcggtcaatatagcacagtctctagagaacgaaacactcaagagcgaagtgtat
ttgttgaatttatccaatctcacacagttgaaaaacaacttgctgagttcaaaaccaatt
gtagggttacttttcaataccaaaacgtacacaattgaagtctcgatccattacaagatc
cagctcacatctaatctataccgtaattgccagacagaggttatcaggaacatccgtatg
ttgatggctaatatcgcacagccgtgtccgactgataatgaacctcataacttggttcat
aagtatagtaaccgagaaagtgtgaccagtggactattctacagatccatatctgaaaac
acagagcaacttccacgtattgaagaggattttgacattcctgagctcgaaacgaacctc
atacgtttccaaaagaaaaccgtgaactggatcctcgaaaaggagaatgtcaagtttaac
ttccacagcaatagatgtactaaagtaccacttatagacgattccgcaatcgaattgata
acctcttcactcagaaatgagccaaccgacaacgacaaactcgatacgcttctttatacc
atcatgaacaaactctgtttcggatggaagaggatctccttgaacaacgagaaatacttc
ttcaatgcctatactgcccatttggcttcgagaaaatccgtgtgcaaatacttgcatagt
tactacaatgatagcgataagctcatgtgtccaaaatacctaccagcacaggcattgcta
tcggaagaaatggggttgggaaaaactgtagaaatgacagcattgatgctcatgaacaag
aggtctatagaagaggttaatgaaccgttaagagttcaactccatacttttggcgaagtc
aaaaccatcataaaagcaaagactacactcgtcattgcgccagattcaatcttgaaacag
tgggtggaagaaatcgttcatctagctccaagtctagctgtaactatttaccaaggtgtg
gggaaatatccaaagttagacaataatgctgtattaatagctgagtatttaagaaagttc
gatgtggtattcacgacgtatgctgtgatatcaagggaattagactatgcattatactct
tccagaggtaaaaacacaagaaacgctacaaaaaaaagaacccaatcagaacactttgaa
gaaacatcagctggagatataattcccagctcttcaactgaaaatgacatagtagttcaa
gatgagcaggcgctcttgagcgactataagtctttatttcaacttgcaattacttccaag
aagcccaagattgcaaacgttagatctagtgattccaacgaaaccgattatgaaatggct
ctacaagatgagattgctttggccatacgccataaccgacttcccgaaatttataagaaa
gtcgactacgaatctccgcttatgttgagtcagttttggagagttgttttggatgaggtc
caaatggtgtcatcgaccatatcaagagctttccagagtgcagcattgatacctagatat
cattcttggggggtgtctggtactccaatcaagaagaatcttggagatttgcattcagtt
cttcatttccttagatatcagccattttgtggtgatgtaggtaagctatcgtgggactac
ataaccgatgttgtcaacaatactaatgatgactttgtaaagctatggactacaattgca
atcagacataccaaggcaatgacccatgacgatattcaattacctcctcagtctcgtgtt
cttttgacaattccttttactcctattgaacaagatttctataatgaaaagttggaagaa
tgtctagctgctatctgtttggatgtcaatggaaatcccataagcaacgattgggaaccc
tctccaacaattatgacatatatgagaacatggttgatgagactaaggcaaatttgctgt
aatccccagattggaaatctcaatcttggatctagaaagtataagaagaactatgcttat
aacaggactttcggtgctattcagcagttgaaaactttggaaaatctcttggatgacatg
ttgaccaaggcatataatgagattgtagagattgaaaaactgattattctgttgtatctt
gatatgggagaattctatgaattcatatacaatcccaaggaagcgcttctttttctaact
gttggagtagatgaaactgaaaagataatacatcgtttgaagttaatccttgagaagtac
atcaaggactatagaagtcagagcagaaagttggatttacagaatagtgacgaaaaggac
gaagatattggaagaatcgacgagcgtggaactccagaacttgctattgtgaaagatgaa
gttttagagaaacttgaagaaaaaatcaaactgactagaattaggatgagaaattggaat
ataatcttgcatcggttctatttccttattgcctcgtcctactttcagcaatatgataag
gaatatatggagatcatgagcaagtctcaggtgtcacagagagatattcacagccttgaa
gaagtgaagaaaatgatgcactacgaagagggctccagagcagacgaattggcgtctttg
gtaaatggcgtagcaccagaggattttgtattcaccaagaagcccattatgactgaatac
gttcaagaagcagatattaaggaatctgagattgaggaggctaagcttaaattcctagaa
ctgaaatactatgatctagctgaagctacccgtggagagattttgcgtggttctatttcc
agtgtggagaatgctgttaaaacaagaatatcaacaagaggtcgctactacgatggccca
ggagaatttgtagataatggaaccactttaatacccagaaactcgaagaagttcttcatg
gtgattccaatcattgaaactgactattttgttgattattcgattttttttaaaattaag
ttatttgtggacaaattgaataggttgattcttgaattgaacacacaagccaatacgatc
aacaattggatgcagaatttggtgagtatcttatgtactcccttgttgaccctggataag
aatcctgttggtaatgaatacgaagaaactattcaggatcaagataaagtatcgtgttat
ttattcgttttgtctcaagtgttgactgatcgctctgaatttgttaatggtgcagagaat
tctacgaagattgtcagtattaaaaaggctcaagaaaagaaagaggcagacttggaatta
cagaaaatcaatgatgaatccttcctaattggattaactgaagctagagaacaaattaga
cctcgtgttaaactgtcattgcaagagttggttttatccatcaagacaattgaagcggaa
cttaaggacgaagaacagaatgaccctgagagaacgagaattcaattggaattacttggc
agcttgggagagcgaattcgaaccgtgtttgaaaaccaaaagctttccatgatcttattg
caaaaggaattgaatgtcaattgtaatgcagttttcaattgccgtattgattattataag
caattgcaacagatctcggacacagtgcagacgtctgatttccatatgaacagagaagaa
ttggttatttccaagatcatgacaaagttggtttcttatgggctgttgcacaagcatctc
aagttcaagatggataaatcagttgcaaaattccgctatttgaggggtttaacaggaagt
gacgaggacattatcaataaggatgaagatgaagccttgatgtgtatcatttgtcgttct
acaattactattggttctctcactcaatgtggccacaagtattgtaaagattgtttggag
cagtggttgaggaacagccatagttgtcccatgtgtaaatcagttatcactacgtcatcg
gtgtacaacttcacacatcataaacctgaccttaaggctaacaaggttgaagatgcgaat
acggttgataagaacaacaatatcttgtattcgatttacaagccgatttcaaaagatatt
atcgatgaaatccaactgataaaattgaagcagtcgtacagttccaaggttaatatgatc
gtcaagcaactgctttatataagaagccagaatccagacgcccagatcgttgtgtttagc
caatggcaggatatgctctatattcttggaactgcttttaaagcagcagatatctcatat
ttaggatcatacggaactttgactccagacattggaggaggaagacgcataaagaagtac
gactctgtggaaacgttcaaagatcctcgtaacaagatcacctgctttttgttgaatgct
aaggcacaggccagtggattgactttgatcaatgctactcatatattcttgtgtgagccg
ttggttaatacgtcgttggaattacaggcgatctcgagaatacacagaatcggtcagaca
aagcccaccactgtgtggatgtttgccatcgagaacacagttgaggaaagcattgtcatt
atgtcgactggaaagaggttggaatatatgaagcagcaatccagcacgccagagacactt
gaaaacgataatcagacagcttcttcatcgacttccgcttctgctctcattgcaaagtcg
aaagaaatcaacttgagcaaggcagagtcgatggcgttgatgaacagtggaggaattgat
accatgatcaacaagggcatggcacagggagaggcggtgaccaacttcgatctttggtct
gctttcttcagtgcacggactcagagtcgtccacttgaacagttgcaggattcgaaggtg
acgtag
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integrated database retrieval system