Scheffersomyces stipitis: PICST_38031
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Entry
PICST_38031 CDS
T01023
Name
(RefSeq) predicted protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_38031
Enzymes [BR:
pic01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PICST_38031
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
PICST_38031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
4851362
NCBI-ProteinID:
XP_001387539
JGI:
38031
UniProt:
A3GGG3
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All DBs
Position
1:1604985..1606136
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AA seq
383 aa
AA seq
DB search
MSKRNNKKLLNQIYSRPLPIELSSDKYGVAMPTLFPHNPVSWLFYLTRLIQVNTLYSVPQ
SSETLIDVSYDSDGIFKVSDEESMAKLWRCGFFGKGTLSRSEPTWKARTIKRLNLDSNTA
NALSMEEVTNKRRDERKKFKAERSRLQELELKQRKGEISDLESSQLEQLRETLASLRLID
FKLSKDSFDRETDLRFEDLDLIESNQLGRNLEFLQLQAIETFFLKFAVNVIRVNDFSTKQ
LFLECCRQSGILKPTNKFVLDYVVYHHYRSLGWCVRSGVKFGCDMLLYKRGPPFIHAEYC
ILVISNDDKARYDWFEMAAKARVIGTVKKTFVLVYVDSPTEERFNSILSSAYSDEGILFQ
DLFKLYKVTEILYRRWAPSKTRD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgtaataacaagaaacttctcaaccagatatattctcgcccgcttccgatc
gagttgtcttctgacaagtacggggtggcgatgccgacgttgtttccacataatcctgtt
tcgtggctcttttatttaactagattgattcaagtaaatactttgtattctgtcccccag
tctctggagacactaatagacgttagctacgactctgatggcatatttaaggtgctggat
gaagagtcaatggcaaaattgtggagatgcggcttttttgggaaaggtactctctctaga
tcagaaccaacgtggaaggcacgtaccatcaagagattgaacttggactcgaacacagcc
aatgctttatcgatggaagaagtaaccaacaagagacgagacgagaggaagaagttcaag
gctgaaaggtctaggctccaggaactcgagcttaagcaacgtaagggcgaaatttcggat
ctagaatcctcacagttagaacaactcagagaaaccctagcatcgctcagattgatcgac
ttcaaattgtcaaaagattcttttgatagagaaacagacttgaggttcgaggatttggat
ctaatagagtccaaccagcttggacggaaccttgaattcttacagttgcaagccatagaa
acgttcttcttgaagtttgctgtcaacgttatccgtgtaaacgacttttccacaaagcaa
ttgtttctagaatgttgtcgtcaatcaggaatacttaagcctacaaacaagtttgtttta
gattatgttgtatatcaccattatcgttcgcttggatggtgtgtgagatctggagtcaaa
ttcggctgtgatatgttgctctacaaaagaggtccaccatttatccatgccgagtattgt
attttggttatttccaatgatgataaggcaagatacgactggtttgaaatggctgcgaaa
gccagagtcatcgggaccgtgaagaaaacctttgtgctcgtgtacgtcgattccccgaca
gaagaaaggttcaactcgatattgagcagcgcatattctgacgaaggtatactcttccag
gacttgttcaagttgtataaagtcactgaaattctttaccggagatgggctcctagcaag
actagggactga
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