Scheffersomyces stipitis: PICST_38727
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Entry
PICST_38727 CDS
T01023
Symbol
SYR1
Name
(RefSeq) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PICST_38727 (SYR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pic01007
]
PICST_38727 (SYR1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_38727 (SYR1)
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_38727 (SYR1)
Enzymes [BR:
pic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
PICST_38727 (SYR1)
Amino acid related enzymes [BR:
pic01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PICST_38727 (SYR1)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PICST_38727 (SYR1)
Prokaryotic type
Other AARSs
PICST_38727 (SYR1)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PICST_38727 (SYR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Tsc35
Motif
Other DBs
NCBI-GeneID:
4851020
NCBI-ProteinID:
XP_001387368
JGI:
38727
UniProt:
A3GFH1
LinkDB
All DBs
Position
1:732160..733971
Genome browser
AA seq
603 aa
AA seq
DB search
MSTSVHAITDGLSKLGLQQPSAIEASTPDYNIIDVFRNYITNELHRVSDVDQEIIFSALD
SPNTLDKGDLIVPVPRLRLKGVNPKDKAVEWSEKFEKGKFLSEVKAEGPFLQFFFNKTLL
YNLVIGDALARKTEYGALPLGLNKKVIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKA
GWNVTRINYLGDWGKQFGLLAVGFERYGSEEKLASDPINHLFEVYVKINQDITAEGETSP
TNEAARLYFKKMEDGDEEALKIWKRFRELSIEKYIDTYARLNIHYDVYSGESQVPKELMK
MATKIFEEKGLIHEDRGAKLIDLTKFNKKLGKTLVEKSDGTSLYLTRDVGEAMKRYNTYK
FDKMIYVIASQQDLHCAQFFEVLKQMGFEWVKNMEHVNFGMVLGMSTRKGTVVFLDNILE
ETKEKMHEVMKANEAKYAQIEDPDKIADLVGISAVMIQDMQAKRINNYEFKWDRMTSFEG
DTGPYLQYAHSRLSSVQRKSGYTEEDLATANYDLLVEPCAANLIRTLAQYPDTIKKALKT
HEPSTIVTYLFNLTHIVSQCYDILWVAGQEKELAVARLALYASAKQVLYNGMTLLGLTPV
DRM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctccgtccacgctatcaccgacggtttgtccaaattgggcttgcaacagccc
tcggccattgaagcctcaactccagactacaacatcatcgatgtcttcagaaactacatc
accaacgaattgcacagagtctccgacgttgaccaagagatcattttctctgccttggac
tctccaaatactttggacaagggagacttgatcgttcccgttcccagattgagattaaag
ggtgtcaatccaaaggataaggctgtagaatggtccgagaagttcgagaagggaaagttt
ctttccgaagttaaagcagagggccctttcttgcaattcttcttcaacaagactttgttg
tacaacttggttatcggcgatgccttagctagaaagaccgaatatggtgctttacctctt
ggcttgaacaagaaagtcattgttgaattctcatctcccaacatcgctaagcctttccat
gctggccatttgagatctaccattatcggtggattcttatccaacttgtatgagaaagcc
ggctggaacgttaccagaatcaattacttgggagactggggaaaacagtttggtttgttg
gccgtaggctttgagaggtacggctctgaagagaagttggcttcggaccctatcaaccac
ttgtttgaggtgtatgtcaagattaatcaagacatcactgctgaaggtgaaacctcgcct
acaaatgaagctgccagactctacttcaagaagatggaagatggtgacgaagaagctttg
aagatctggaagagattcagagagttgtccattgaaaagtacatagatacgtatgctcgt
cttaacatccactatgacgtctactctggtgagtcgcaagttcctaaggaattaatgaag
atggccactaaaatctttgaagaaaaaggtttgattcacgaagacagaggagctaagctt
attgacttgaccaagttcaacaagaaattaggtaaaacattggtcgaaaagtctgacggt
acctctttgtaccttacccgtgacgttggtgaagccatgaagcgttacaacacctacaag
ttcgataagatgatttatgtgattgcctcgcaacaagatttacattgtgctcaattcttt
gaagtgttgaagcagatgggctttgaatgggtcaagaacatggaacatgttaacttcggt
atggtattaggtatgtctaccagaaagggtacggttgtctttttggacaacatcttggaa
gaaaccaaggaaaagatgcacgaagtcatgaaggccaacgaggccaaatatgctcaaatc
gaagaccccgacaagatagccgacttggttggtatctcggccgtgatgatccaggacatg
caagctaagcgtataaataactacgagtttaagtgggacagaatgacatcattcgaaggt
gacactggtccatacttgcaatatgctcactctcgtttgagctcagtgcaaagaaagtct
ggctacactgaagaagacttggctactgcaaactacgacttgttggtagaaccatgtgca
gccaacttgatcagaaccttggctcagtaccctgacactatcaagaaggcattgaagaca
cacgagccttccaccatcgtcacctacttgttcaacttgacccatattgtatctcaatgt
tatgacatcttgtgggttgctggccaggaaaaggaattggccgtcgccagattggccttg
tacgccagtgccaagcaggtgttgtacaacggtatgacgttgttgggcttgactcccgta
gacagaatgtga
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