Scheffersomyces stipitis: PICST_38818
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Entry
PICST_38818 CDS
T01023
Symbol
UTAF1
Name
(RefSeq) Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa subunit) (U2 snRNP auxiliary factor small subunit) (U2AF23)
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_38818 (UTAF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_38818 (UTAF1)
Spliceosome [BR:
pic03041
]
Complex A
U2 snRNP components
U2 related factors
PICST_38818 (UTAF1)
Complex B
PICST_38818 (UTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
RRM_1
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
4851209
NCBI-ProteinID:
XP_001387460
JGI:
38818
UniProt:
A3GG10
LinkDB
All DBs
Position
1:1201743..1202294
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AA seq
184 aa
AA seq
DB search
MHKNVIARNGEDRLPCTFYNKIGACRHGEKCSRKHIRPLTSFTILLPNLYQNPKLNKNEG
EELNPKQLQQNFDQFFKDIFVKFATLGEIKELVVCENENNHLNGNVYVRFKTKQEAAEAT
LLLNQEWFNARPVHCELSPVSSFPEANCRAYETSSCTRGDHCNFMHVRHPTQSLVESLFQ
SQTK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaatgtcattgctcgaaacggagaagacaggctaccatgtaccttttacaac
aagataggtgcttgtagacacggagaaaagtgttccagaaaacatatacggcctttgact
tcatttacgatactcttgcccaatctttaccagaatcccaagttgaacaagaacgaagga
gaagagttgaatcccaaacagcttcagcagaactttgatcaatttttcaaagatatcttt
gtcaagtttgcgactttgggcgagataaaagagctcgtggtttgtgaaaatgagaataac
catcttaatggaaacgtatatgttcgattcaagactaaacaagaagctgctgaggctaca
ttattgcttaaccaggaatggtttaatgccagaccagtacattgtgaattgtcacccgta
tctagctttccggaagctaactgtagagcttatgaaacgtcactgtgcacaaggggagac
cattgtaactttatgcatgtgcgacatcctacccagctgttggtagagagtctttttcaa
tcgcaaaccaaa
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