Scheffersomyces stipitis: PICST_38880
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Entry
PICST_38880 CDS
T01023
Symbol
SPT15
Name
(RefSeq) TATA-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_38880 (SPT15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pic03000
]
PICST_38880 (SPT15)
03021 Transcription machinery [BR:
pic03021
]
PICST_38880 (SPT15)
Transcription factors [BR:
pic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PICST_38880 (SPT15)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PICST_38880 (SPT15)
RNA polymerase III system
TFIIIB
PICST_38880 (SPT15)
RNA polymerase I system
SL1/TIF-1B
PICST_38880 (SPT15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
4851092
NCBI-ProteinID:
XP_001387406
JGI:
38880
UniProt:
A3GFP3
LinkDB
All DBs
Position
1:<909439..>910182
Genome browser
AA seq
247 aa
AA seq
DB search
MDSLKLPTNPAQAKAFTAPNSLLFPQGFDGENKPVDGQPQPGSQEIIKSEQTADIVEPKQ
EEDDGATSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTA
LIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLE
GLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFESIYPV
LSEFRKS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggattctttaaagttgcctacaaatccagctcaagccaaagcttttactgctccaaac
tcgttgttgttccctcaaggatttgatggagaaaacaagccagtagatggtcagcctcaa
cctggctctcaggaaatcattaagagcgaacagactgcggacattgttgaacctaagcaa
gaggaagatgatggtgctacttctggtattgtgccaacgttgcagaatattgttgctacc
gtcaacttggattgtcgtttggatttaaaaaccatcgcattacatgctcgtaatgctgaa
tacaacccaaagcgttttgccgctgttatcatgagaattcgtgaaccaaagacgacggct
ttgattttcgcttctggtaagatggttgtcactggtgctaagtctgaagatgattcgaaa
ttggcctcaaggaagtacgccagaattattcaaaagttaggtttcaatgctaaattcact
gatttcaagattcagaatatcgtcggctcgtgtgatgtcaaatttcctatcagattggaa
ggattggcattctcacacggaactttctcgtcgtatgaaccagaattattcccagggttg
atttatagaatggtgaaaccaaagattgtcttgttgatcttcgtatcaggcaagattgtg
ttgactggtgccaaacaaagagaagagatttatgccgcttttgaatcgatttatccggta
ttgagtgaattccgtaagtcatga
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