KEGG   Scheffersomyces stipitis: PICST_40336
Entry
PICST_40336       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K15171  transcription elongation factor SPT4
Organism
pic  Scheffersomyces stipitis
Pathway
pic03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PICST_40336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_40336
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_40336
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     PICST_40336
  RNA polymerase I system
     PICST_40336
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     PICST_40336
SSDB
Motif
Pfam: Spt4 Zn_ribbon_RPB9 DUF8512
Other DBs
NCBI-GeneID: 4836943
NCBI-ProteinID: XP_001382943
JGI: 40336
UniProt: A3LNS8
LinkDB
Position
2:complement(<896606..>896944)
AA seq 112 aa
MSSRSERACMLCGIVQPMKRFVDYGCPNCESLLHFQDNEEGQVQDCTSPSFEGLVALGQD
NRNSWVARWLRIDSFNPGLYAVKVNGKLPPHIISDLEAQDVIYRPRDGSAED
NT seq 339 nt   +upstreamnt  +downstreamnt
atgtccagcagatcagaaagagcgtgtatgctctgtgggatcgtccagcccatgaagagg
tttgtcgactacggctgtcccaactgtgaatcacttttgcattttcaagataatgaagaa
ggacaagttcaggattgcacatctccttctttcgaagggttggttgccttgggtcaggac
aacagaaactcgtgggtagccagatggttacgtattgactcgtttaaccctggactttat
gcggtcaaggtgaatggaaagttgcctcctcatatcatcagtgacttggaagcccaggat
gtgatatacagacccagagatggaagtgccgaggattag

DBGET integrated database retrieval system