Scheffersomyces stipitis: PICST_41858
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Entry
PICST_41858 CDS
T01023
Symbol
RAD30
Name
(RefSeq) DNA polymerase eta subunit
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
PICST_41858 (RAD30)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_41858 (RAD30)
Enzymes [BR:
pic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PICST_41858 (RAD30)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
PICST_41858 (RAD30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
zf_UBZ
IMS_C
Motif
Other DBs
NCBI-GeneID:
4837607
NCBI-ProteinID:
XP_001382310
JGI:
41858
UniProt:
A3LN71
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All DBs
Position
2:389058..391322
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AA seq
733 aa
AA seq
DB search
MSVKQEFSPGACLATTAAYSTSQFTFKDLRDLNDPSLSYLSPLSVISLIDLNAFFAQVEQ
LRLGLPVETPVVCVQWSTLIAVSYAARKFGIGRLDTLQSAKQKCPNLVCAHAAVFKKGES
HWAYTKGLPNQATHKVSLDPYRRESRKIVKIFQQHCDLVEKASVDESYLDLGRLVYKKLL
SLFPLLAEGQDSDYMPSLPDTLPEELQFRGVVIKSTEEENLIQNNTIMSLSQQFPEGPPT
IGDWDDVCMLIGSMIVLDIRKALYDEMGYTTSAGIASNKQVAKLAGGFKKPDNQCVIRNR
STYSFLNNFELNDVTSMGGKTGDFVLQKLRVPPDKGISYIRENFTLEAIEEEFNDDIPLA
KKIYEIVRGNHRRELVNRMDVKSMMSRKNFLAKHPVETLSDADSWIKVFAGDLYNRMIEL
DEENLRLSMSQVSNKEKGVIKRPKTLSINLGTSSGIRRSKQAQLMQYSSLDRLWEHFEQI
GYRILRDLLETITETAKLNGGRTLKELEAQSLDPRKIKVASISHLSLTISNFIKANDSSL
IDSYTGNTETDKESAQAKLKQMFDEVNKSALEKQEKEPSPAPQPRIISSEDKSYIKKLFD
DFQMSNHIEEASKSPKRSENKAQGSSMKTSSEKHDSKYIKKLFEDYQTQASLDLTLKSNS
GIQHAKEENTKRKLDIFQSLQKRQKPQSKSTDDFLNTLLQTMYCPQCKEEIDNAVEHNDF
HVAMEISNRINGH
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaaacaggaattttccccaggcgcatgtttggctacaacagccgcgtattcg
acctcccagttcacgtttaaagatcttcgtgatttgaatgacccactgctatcgtacttg
ctgccactctctgtgatatcgcttatagatctaaatgcgttttttgcccaggtggagcag
ttgcggttgggtttgcctgtggaaacacctgtagtttgtgttcagtggctgactttgatc
gccgtctcatacgctgctcgtaagtttggcattggcagattggataccctccagtccgct
aaacaaaagtgtcccaatcttgtgtgtgcccatgctgcagttttcaaaaagggggaatcg
cactgggcatatactaagggcttgcccaaccaggcaacgcacaaggtgtccttggatcct
tatcgtcgtgagagtaggaagattgtcaagatcttccagcaacattgtgatttggtagaa
aaggctagtgtggacgagtcgtacttggatttgggaagactagtttacaaaaaacttctt
agcctattccccctacttgctgaaggtcaagattcagattatatgccttcgttgcccgac
actttacctgaagaacttcaatttcgtggggtcgtaataaagtctaccgaagaagaaaac
ctcattcaaaataacacaatcatgagtttgtcgcaacaatttcccgagggaccacctaca
ataggtgactgggatgatgtatgtatgctaattggatctatgattgtcttggatatccgt
aaggcactttacgacgaaatgggatacaccacatccgcaggaatagccagtaacaaacaa
gttgccaaacttgctggtggattcaagaaaccagacaaccaatgtgtgatcagaaatcga
ctgacctacagtttcttaaacaactttgagttgaatgacgttaccagcatgggtggcaag
acaggagatttcgtgctacagaaattgagagtaccgcctgacaaggggatttcgtacatc
agagaaaactttactttagaggctattgaagaagagtttaatgatgatatacctttggca
aagaagatatacgagattgtgagagggaaccatcgccgtgaactagtgaataggatggat
gtaaaatcaatgatgtcccgcaagaacttcttggcgaagcacccagtggagacattgagt
gatgctgattcgtggattaaagtgttcgcaggggatttgtacaatagaatgatcgaactt
gacgaggagaatttacgtttgtcaatgctgcaggtttcaaacaaagaaaagggtgtcatt
aaaagacccaaaacattgtcgattaacttaggtacatcgagtggaatccgacgctctaag
caagcccagttgatgcaatatagttctttggataggctatgggagcattttgagcaaatt
ggatatagaattctaagagatcttcttgaaacgataacagaaacagcaaaactcaatggc
ggaagaacgttgaaggaattggaagcgcaaagtcttgatcccaggaaaataaaggttgcg
tccattagccatctttcattaaccatttccaatttcataaaggctaatgattctagtctt
atagactcctatactggaaataccgaaaccgacaaggaatccgcacaagcgaaattgaag
cagatgtttgatgaagtgaataaatcagcattggaaaagcaggaaaaggaaccttcccct
gctccgcagccacgaataatatcgagcgaagacaaatcctacatcaagaaattatttgac
gactttcaaatgtccaatcatatcgaggaagcttccaagagccctaaacgttcagaaaac
aaggcacaaggctcttccatgaaaacgtcttccgaaaagcacgattcaaaatatatcaaa
aaattatttgaagattaccaaacacaagcttccttggacctcacgctcaagagcaattcc
ggaatccagcatgctaaggaggaaaatactaaaaggaagttggatattttccaatctctt
caaaaacgccaaaaacctcaaagcaaaagcacggatgacttcctcaacactttattgcag
accatgtattgccctcaatgcaaggaggaaatcgacaatgctgtcgaacataatgatttc
catgtagcgatggagatttccaatagaattaatgggcactag
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