Scheffersomyces stipitis: PICST_42357
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Entry
PICST_42357 CDS
T01023
Name
(RefSeq) peroxisome assembly protein 12
KO
K13345
peroxin-12
Organism
pic
Scheffersomyces stipitis
Pathway
pic04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PICST_42357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_42357
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
PICST_42357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
SPEF2_C
Rad50_zn_hook
MAS20
Rtf2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
4837248
NCBI-ProteinID:
XP_001382813
JGI:
42357
UniProt:
A3LN22
LinkDB
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Position
2:complement(250546..251943)
Genome browser
AA seq
465 aa
AA seq
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MEYYSSLDASQLDSETPTLFELISASQLESLLSPSLRYILVHYASRYPKYLLRINNRFDE
LNLVLRSFVEWYFVQYWHGSFTENFYGLKRVNQTPLNNGNYNANKLTSVVPAMVEERRAL
TSLQKLVSVFEITGTAYVSEKLNYCYEIWYTKYVTNQLNTHESNSKEENLRISLKRKFVE
IYPYVQSAYRAANFITTLMYLSGHSKSPTLLTYLFRMNYARLSQYDYAKHEPKPVNPDVK
RPNRIAPQTTSEVVAKFLSKYLTNPSWKLVSFILGTFFPVAIFSLKFLEWWNNSDFASKL
SKNQGNILDFTLPPPGLVTEALKEAKEANRKAKRYSSNKTCPICKKELTNPAIIETGYVF
DYACIYNYLEKSHIIVNDKLKKRKNKELDEEDEEEEEEESEIDSEAEEQEKEEEPQDYEP
KQEQDFTIDINKGGRCPVTGRKLLGCKWNAIKEEWEIEGIRRLIF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggagtactattcatccttagatgcttcccagctagattcagagactccaacgcttttt
gagctcatttccgccagccaactcgagtcccttctttctccatccttacgttacatatta
gtacactatgccagccgctatcccaagtacttattgcgaatcaacaaccgctttgacgaa
ctaaatttggtgttacgaagctttgtggaatggtacttcgttcagtactggcacggctcg
ttcactgaaaacttctatggactcaaaagagttaatcaaacaccgttgaacaatggtaat
tacaatgccaataaacttacgctggtagttccggctatggtagaggaaagacgcgctttg
acatcccttcagaaactcgtatctgtatttgagatcacgggtacagcatatgtctctgaa
aaattgaattattgctacgaaatatggtatacaaagtatgtgacgaatcagctcaatacc
catgagtctaattccaaggaagaaaacttgcgtatttcgttgaaaaggaagtttgttgag
atatatccctacgtccagagtgcctatcgagctgcgaatttcataactactctcatgtat
ttgagcggtcacagtaaatcgccaaccttgctcacatacttgttccggatgaactacgct
cgattgagccaatatgactacgctaagcatgagcctaaaccagtgaatccagacgtcaag
agacctaatcgtatagccccacagacaacttcagaagtcgtagcgaaatttttgtctaag
tatttgacgaatccatcctggaaacttgtctctttcatcttgggaactttctttcccgta
gctatcttctcgttgaagttcttagaatggtggaacaactcagattttgcctcgaagttg
tctaagaaccagggcaacattctcgacttcacattgcctcctcctgggttggttaccgag
gcattgaaagaagccaaagaggccaacagaaaggcgaagagatactccctgaacaaaaca
tgtcccatctgtaagaaagaattgacaaatccagcgattatcgaaacaggctatgtgttt
gattacgcctgtatatacaactatcttgaaaagtcacatattatagtcaatgacaaattg
aagaagagaaaaaacaaggagcttgatgaagaggacgaagaggaagaagaggaagagtca
gaaattgactctgaagccgaggaacaagagaaagaagaagaaccgcaagattacgaacca
aaacaagaacaagattttacaatcgacatcaacaagggtggtagatgtcctgtgacaggc
agaaagttgcttggatgcaaatggaatgccatcaaagaggaatgggaaatcgaaggaata
agaagacttatcttctag
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