Scheffersomyces stipitis: PICST_42612
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Entry
PICST_42612 CDS
T01023
Symbol
ROM2
Name
(RefSeq) Gdp-GTP Exchange Protein (GEP) for the Rho1p Small GTP-binding Protein
KO
K19842
RHO1 GDP-GTP exchange protein 1/2
Organism
pic
Scheffersomyces stipitis
Pathway
pic04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
PICST_42612 (ROM2)
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Gene cluster
GFIT
Motif
Pfam:
CNH
RhoGEF
PH_5
DEP
Motif
Other DBs
NCBI-GeneID:
4837339
NCBI-ProteinID:
XP_001382323
JGI:
42612
UniProt:
A3LN99
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Position
2:456561..459458
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AA seq
896 aa
AA seq
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MQPLPYNSSVYPALLSEVAKVFKEVIILTINTKDGLEYHDTFTGKMSVDIICRIIRTSDR
NLALLLGRSLDAQKFFHDVTYNHRLRDSVHEVYAFSHIYSDEASASQQTGVNGVFTILTD
CYSPTCTRNRLCYSIACPRRLEQQARLNMKPQGGLKRAVSRLSLHEKEETKTLWHETVPQ
SILDKLDKQEKMRQELIYEFIYTERDYVKDLEFMTDFYIMPLRNPANNIIPENQRETFIH
TVFGGVGDLLRLAKNMSEALTRRQQQQKPVVETLGDVFLDYVGNFEPFIRYSGNKVFASF
EHERQQQVNMRYARFLDAIEKKPESRKQDLSSFLIKGVQRPARYQLLLGGILKNTKPESP
DYKNLVKAKEEIERVLGKINIQTGESTDRHKIMVLHRLLGKQTLETKYNFKLSYNHRIIY
QVTLSRKRDNEKIDLYLFEHALLLVKHKIQNKREQHKVFEKPLYLPLLYANSGYDVPTIR
SVISHRYRGSVISDTGLKNRAESTTYIGTTLNSNSTNKFQLNILGLGSNQVHATLFADEL
SVQNQVLQQIYNQQKKLIEENDLFSLSKYETRRFHGNNKINCAVPCYGGKKLLYGTDSGV
WVSTVRSISATSNEKICSDPTLVISKMYVTQIEVVVEYSKILILSDKTLYEFDLSCTDSL
DHQKNTKSGKMILNHVSFFKIGICDGRLLVCAAKTGSTHSISIFEPANPFDKNNQRNKNK
KYDIQEVTFSSDPISISFLKTMLCVGCTKGFESLSLEKGMKESILDEADPSLDFAIQRET
VTPLAIHRLGRSDFLLCYAEFVFLINKNGWRTNHYWDIYWEGNPQNVALFFPYLLSFEPG
FIEIRDLNSTKLLRALVGDNIRFLHSNEHEALYACSENGYDIIVSIDFLNLKPRTA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctttgccatacaattcttcggtatatcctgctcttttgtcagaagtagctaag
gtctttaaggaagtcattatcttgaccataaacaccaaagatggtttggagtaccacgac
acttttactggtaaaatgtcggtggatatcatctgtagaattatccgtaccagtgacaga
aacttggctttgttattgggaagatcgttggatgcacaaaagttctttcatgatgttact
tataatcacagattgagagactctgtccacgaagtatatgctttcagtcacatttatagt
gacgaggcttctgcttcacaacaaactggcgtcaacggtgttttcaccattttgaccgac
tgttactcgcctacttgtacgagaaacaggttgtgttacagtattgcttgtccacgtaga
ttggagcaacaagcacgtctcaatatgaagccacagggcggattgaagagggctgtttct
agattgtctttgcatgaaaaggaagaaaccaagacattatggcacgaaacagttccacaa
tcgatcttggataaattggacaagcaagaaaagatgagacaagagttaatctacgaattc
atctacaccgaaagagactatgtcaaggatcttgaattcatgaccgatttctatatcatg
ccattgcgaaaccctgccaacaatatcattcctgaaaaccagcgtgaaacgtttatccac
actgtttttggaggagttggcgacctcttaagattggctaagaatatgagtgaagcttta
accagacgtcaacaacagcagaagcctgttgtcgaaacgttgggtgatgtgttcttagac
tatgttggcaactttgagccgtttattaggtattctggtaacaaggtatttgccagtttc
gagcatgagagacaacaacaggtcaacatgagatacgcccgctttttggatgcaatcgaa
aagaaacccgagtccagaaaacaggacttatcttctttcttgatcaagggagtccagaga
cctgccagatatcagttgttgttgggcggtatcttgaagaatacaaaaccagagtcgcct
gactataagaatctcgtcaaggccaaagaagagatcgagagggttttaggcaagatcaac
atccagacgggtgaaagcactgacagacacaagatcatggtgttgcatagattgttagga
aaacaaacgttagaaacgaagtacaacttcaagttatcctacaatcaccggattatctat
caggttacgttaagcagaaagagagataacgaaaaaattgacttgtatcttttcgagcat
gctcttttattggtgaaacacaagatacagaacaagagagaacagcataaggtgtttgaa
aagcctctttatctccccttattatatgccaatagtggctatgatgttcctaccatcaga
tcggtgataagccatagatacagagggtctgttatatctgatactggcttgaaaaacaga
gcagaaagcaccacgtacattggtactacgttgaactccaattctaccaacaagttccag
ttgaacatcttgggattgggaagtaaccaggtccacgctacgttgtttgcagatgagtta
tcagtgcagaatcaagtcttgcagcaaatctacaaccaacagaagaagctcattgaagaa
aatgatttgttctcgttgtccaaatatgaaacaagaaggttccatggcaacaataagatc
aactgtgctgttccctgttacggagggaaaaagttgttgtatggtacagattctggagtg
tgggtatctactgttcgttccatcagcgctacttctaacgaaaagatctgttcagatcca
acgttagttatcagcaagatgtacgtaactcagattgaggttgtggtggagtactccaag
atcttgatcttaagcgacaagactttatacgagtttgatttgtcgtgtacagattctttg
gaccaccaaaagaacaccaagtctggcaaaatgatcttgaaccacgtctcgttcttcaag
attggtatatgtgacggaagattgttggtatgtgccgcaaagactggaagcacccactcc
atcagtatctttgagcctgccaatccgtttgacaagaataaccagagaaataagaacaag
aagtacgatattcaggaagtgactttttcgtctgatcctatatcgatttcgttcttgaag
acaatgctctgtgttggttgtaccaagggctttgagagtttgtcattggagaagggaatg
aaggaatcgattcttgacgaagctgatccttcattggatttcgctatacaaagagaaaca
gtaactccgttggctatccacagattgggcagaagcgacttcttgttgtgttatgctgaa
ttcgtattcttgatcaacaagaatgggtggagaacgaaccactattgggatatctactgg
gaaggtaatccacagaatgtagcgttgttctttccctacttgttgtcgtttgagcctggc
ttcatagaaatcagagacttaaactccaccaaattgttgagagcgttggttggcgacaac
atccggttccttcattccaacgagcatgaagcgttgtatgcctgctccgagaatggctac
gacatcattgtgtctattgacttcttgaacttgaagccacggaccgcataa
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