Scheffersomyces stipitis: PICST_46492
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Entry
PICST_46492 CDS
T01023
Symbol
SPT8
Name
(RefSeq) transcription factor, probable member of histone acetyltransferase SAGA complex
KO
K11360
transcriptional activator SPT8
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_46492 (SPT8)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_46492 (SPT8)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PICST_46492 (SPT8)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PICST_46492 (SPT8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
DUF2457
Beta-prop_EML
NBCH_WD40
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
4839232
NCBI-ProteinID:
XP_001384840
JGI:
46492
UniProt:
A3LVN4
LinkDB
All DBs
Position
5:891037..893103
Genome browser
AA seq
662 aa
AA seq
DB search
MNSGNYGVDDDDLENNTNENEEDDEEGDGEDDEPDGDGEDEDGEEGEDADEDEDEDNEDN
EENEDEENDNDNEDEEDDDEEEDEDEEMNAEEDDEEDEDAKFMDARETNDDVLMAQDDAE
KEADITRKEAGDKADGDDSKTENEETQKEKSEESESNENEEIDNQTFRERVISKAKIATQ
FDITPSVAIPYTSQCHSMAFTEGPKWILTGGEDGFIRKYDFIASIQGKSPLTMAQKHNLV
DSLTKAGVICSYWENEQPWTRKELMKSNPKLKVSDFSTGSVSYEPKPNPVYSLDVERNGY
WCLSGLLSGGISLYTMRYSEGNIHHYFKHGTRKDNSKGHSDAVSVLRLNTDQDKFLSGSW
DKTIREWDLNSGKCTAKFTGSSGQISNVQYRPLGLTDLSLDIVEEETNDNNNENGNKVKA
EEEDDVDSLFGDSDEEPGKEGERKQEESKDSSNSKPTFNTTKSTNKTYKNDDIFMSSSID
GTVNIWDARVSAPVLRLGVSEGVPPYCMSSTWSNCGEYIYAGRRNSSVEEFSIRMPHKRA
KTGHNKDTMIPNVSKLLQFPKISGPVSAISTMPNSNFLLCGSYDNIRLYDLTLYDELSNA
SINKNKQATPFLIVPGHHGGILSCLHVDDTGRFMISASGNRGWGHSSYTDTVLIYEIDFE
GI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggaaattatggggtagatgacgatgatttagagaacaataccaacgagaat
gaagaagatgacgaggaaggagatggcgaagatgacgaaccagatggagacggcgaggac
gaagatggcgaagaaggcgaagatgcagatgaagatgaagatgaagataatgaagacaac
gaggaaaatgaagatgaagaaaacgacaatgacaatgaggacgaagaagacgatgatgaa
gaagaagatgaagatgaagaaatgaatgccgaggaagacgatgaagaagacgaggatgca
aagtttatggatgcacgtgagaccaatgatgacgttctaatggctcaagatgatgcagag
aaagaggctgatataacaagaaaagaagcaggtgacaaagccgatggtgacgactccaaa
actgagaatgaagaaactcaaaaagagaaaagtgaagaatctgaaagtaatgaaaatgaa
gaaatagataatcagacatttagagaaagagtcatttccaaggctaaaattgctacccag
ttcgatatcacaccatcggtggccataccttatacttcacagtgtcattctatggcattt
actgaggggcccaagtggatattgactggtggagaagacgggtttatcagaaaatacgat
ttcatagcgtcgattcaggggaagtcacccttaactatggcacaaaaacacaatctcgtc
gattcactcactaaggctggagttatatgttcttattgggagaacgagcagccatggact
cggaaagaactcatgaaatccaaccccaagttgaaagtcagcgatttcagtactggctct
gtgagttacgaacccaaaccaaaccccgtatattctttagatgtagaaagaaacggttac
tggtgcttgtctgggttgttgtctggaggaatatcgttatataccatgcgttacagtgaa
ggaaacatacaccactactttaaacatggaacaagaaaagataatagtaagggacatagc
gatgctgtgtctgttcttcgtctcaatactgatcaagacaagttcttgtctggttcttgg
gataaaactatacgagaatgggatctcaacagtggcaaatgtacagccaaatttactgga
agctctggacagatttccaatgttcaatatcgaccattaggcttaacagatttatcccta
gacattgtggaagaggaaacaaatgacaataataacgaaaatggtaataaagtaaaagcc
gaagaagaagatgacgtcgattctttgtttggtgatagtgacgaagagcctggtaaggaa
ggtgaacgtaaacaggaagaaagtaaagattccctgaattccaaaccaaccttcaacaca
accaaatctaccaataagacatataaaaacgacgatatctttatgagttccagtattgat
ggaaccgtcaacatctgggatgccagagtatctgctccagtgttgcgcttaggtgtttct
gaaggtgttcctccgtattgcatgtcttccacatggtccaactgtggagaatacatttat
gctggaagaagaaatagctcagtagaagaattttcgatccgaatgcctcacaaaagagcc
aaaactggccacaataaagataccatgattcctaatgtcctgaagctcttacagttcccc
aagatatctggacctgtcagtgccatttccaccatgcccaatagcaacttccttttgtgt
ggatcttatgacaacatcagattgtacgacttgacgttgtatgatgaactctcaaacgct
tctataaacaagaacaagcaggccacgccgttcttgattgtaccaggccatcacggagga
atccttagttgtctccacgtagacgacactggcaggtttatgatcagtgccagtggaaat
aggggatggggccattcgtcgtatactgacacagtgttgatctacgagatagacttcgaa
ggtatatga
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