Scheffersomyces stipitis: PICST_46506
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Entry
PICST_46506 CDS
T01023
Name
(RefSeq) predicted protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_46506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_46506
Spliceosome [BR:
pic03041
]
Complex B
Other components
Prp19-related factors
PICST_46506
Complex C
PICST_46506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
4839522
NCBI-ProteinID:
XP_001384954
JGI:
46506
UniProt:
A3LW91
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All DBs
Position
5:<1394569..>1395576
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AA seq
336 aa
AA seq
DB search
SDDFSICDDCLGPDKHLKMIKQNMGEECKSCTRPFTVLRWNNSVSVNKSKKTIICYTCAR
AKNCCQSCMLDVNYRIPIDIRDTALKMAGLENPAQLLGASSSTTNREVKAIIADKQDQIF
KQKDELDSGDVDRRNEAREILMKLSQRLNDNSKLTKTKSLKSDKAEEEKLNKTDVSKIVA
KLPFGGSLDVEKHPEVASFFLFGISSDLPQYAISEFFGSFGKIKTIQIVHRAKCGYVALS
SRKTAEEAAKSIVSNGLNENRATAGLVILLEKYPMRVCWGKPKSLGVTNDEHYKISLVVN
KVMRQLAEKDTAFSTKNNKTISSAKTEKNTTATNKN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
agcgatgatttttccatctgcgatgattgcttaggcccagataagcatctcaagatgatc
aagcagaacatgggagaagagtgcaaatcgtgcaccagaccgtttacggtactccgatgg
aacaattcggtttcagtcaacaagtccaagaagaccataatatgttatacttgcgcacga
gctaagaactgctgtcaatcgtgtatgctcgatgtgaattatagaatacccattgatata
cgagatacggctttgaagatggctggcttggaaaacccagctcagcttctaggggccagt
agtagtacgaccaatagagaagtcaaggcgataatagcagacaaacaggatcaaatattt
aaacaaaaggacgaactcgattctggagatgttgatagaagaaacgaagccagagaaatc
ctcatgaaattgtcacaacgactcaacgacaatagcaaactaacaaagacaaaatcccta
aagtccgacaaggcagaagaagaaaaattgaacaagacggatgtgagtaaaattgtggca
aagttaccctttggagggctgttggacgtagaaaaacatcctgaagttgcttcatttttt
ttgtttgggattagttccgatttgcctcagtatgccattagcgaatttttcggcagtttc
ggtaagatcaagaccattcagattgtccatagagccaaatgtgggtacgtggcattaagt
agcagaaagactgccgaagaagcagccaagtcaatcgtctctaatggactcaacgagaac
agagccactgctggtctagtgattctacttgaaaaatatcccatgagagtctgctggggc
aagcccaagtcgctaggagtgactaatgatgaacactacaagatcagtttggtggtaaac
aaggtaatgcgacagttagccgagaaagacactgcttttctgacaaagaataataagact
ataagtctggctaagactgaaaagaatactacagccaccaataagaac
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