Scheffersomyces stipitis: PICST_46601
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Entry
PICST_46601 CDS
T01023
Name
(RefSeq) predicted protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_46601
Enzymes [BR:
pic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PICST_46601
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PICST_46601
Prokaryotic type
PICST_46601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
4839501
NCBI-ProteinID:
XP_001385259
JGI:
46601
UniProt:
A3LW69
LinkDB
All DBs
Position
5:complement(1330392..1332434)
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AA seq
680 aa
AA seq
DB search
MSQKRGIDSEQVLASSKKFKVETPEVAKKSIQEHEVGITSYINKTETGFTGLIKSLYSDF
QVNEIDVSGNVVHLVDEGIDVGKSKKERKMEKRAEDRKELQGKTEEEIEAIKAQKKEEEE
NKSKYDLSDEHRQELLTYITNDELAQIEELFSTGNNMETKTSFDDKQQRGKLHQLLRAAF
QGKLESITSPENTFKIAIAKKTSRGRQHPQESMHHVDENGILNYGLGAFKPYLHFTVFKE
NRETMEVASTISKFLRIPHKAINYAGTKDRRGATCQRFSIHKGKVVRVNSLNKALKNTVL
GGFTYEDSPLGLGDLKGNQFTITIRDVEPLGGENLAEIVDNSFTSLKEKGFINYFGMQRF
GSFSISTHMLGIHLLKEEWKDAAELILSEQDIVAPDSIEARRIWAETKNPSLTLKKLPHY
FSAETAILKVLDTEQLDENEEYGKNSYFKSIMAIPKNLRMMYSHAYQSYVWNLVASKRIE
LFGLELQEGDLVIDDEIKVKSDQDDDFEEDVKVNRDVKVKSITKEDVESGKYSIYDVVLP
TPGFKVQYPTNEKLAQVYVQTMAQDGLDPYKMGRRIKEFSLTGSYRNLMTRPENLTYKIV
KYSDNSVPLVRTDLEILRLKKEGKDVERIIKVEGDEATKTAVVLTMQLGVSSYATMAMRE
FMKADTSRWSENMMKKEETK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaagagaggtattgattcagagcaggtgcttgcttcttccaagaagttcaag
gtggaaacaccagaagttgccaagaagtctattcaggagcatgaagtaggcataacttct
tatatcaacaagaccgagaccggatttactggtctcatcaagctgctctattcagatttc
caggtcaacgaaatcgatgtcctgggtaatgtcgtccatttggtcgatgaaggcattgat
gtaggaaagagcaagaaggaaagaaagatggaaaagagggccgaagacagaaaggagtta
cagggcaagactgaagaagaaatagaagctatcaaagcccagaaaaaagaagaagaagaa
aacaagtccaagtacgatttatcagatgaacatcgtcaagagcttttgacttacatcacc
aatgacgaattggcccagatagaagagttgttctctacaggaaacaacatggaaacaaag
acttcctttgatgataagcaacagcgtggaaaattgcaccaattgcttagagcagccttc
cagggcaagttggagtccattacttcgccagaaaatacattcaagatcgccatagctaag
aaaacttctagaggaagacagcatcctcaagagagcatgcaccatgttgatgagaacgga
attttgaactatggattgggagctttcaagccttacttgcatttcactgttttcaaggaa
aatagagaaactatggaggtagcctccaccatttccaagttcttgagaatacctcacaaa
gcaattaactatgctggtaccaaagacagaagaggagccacttgtcagagattcagtatt
cataaaggaaaggttgttagagtcaactcgttgaacaaggccttgaagaataccgtttta
ggtggattcacctatgaagactctcccttgggattgggtgatttgaagggtaaccaattc
acaatcactatcagagatgttgaaccattgggcggagagaaccttgctgaaattgtcgac
aatagtttcacatcgctcaaggaaaagggatttattaactactttggaatgcaaaggttt
ggttctttttcgatctctacacatatgcttggtattcatctcttgaaagaagaatggaaa
gatgccgccgagcttatcttgtcagaacaggatatcgtcgcaccagactcgattgaagcc
agaagaatctgggcggaaaccaagaacccatcattgacacttaagaagttacctcactac
ttttctgcagaaacagccatcttgaaggtgttagacactgaacaattagacgaaaacgaa
gagtatggaaagaattcctatttcaagagtatcatggctattcctaagaacttgcgaatg
atgtactcgcatgcctaccaatcgtacgtgtggaacttggttgcatccaagagaattgaa
ttgtttggtcttgagctacaagaaggagatttagtcattgacgacgaaatcaaggtcaaa
tctgaccaagatgacgattttgaagaagatgtcaaagtcaacagagatgtcaaggttaaa
tctattactaaggaagacgtggaatctggaaaatatagtatctacgacgttgttttgcca
actccaggattcaaggtccagtatcccactaatgagaaattggcgcaagtctatgttcaa
acaatggcacaagacggcttggacccatataagatgggcagaagaatcaaagagttctcg
ttaactggatcttaccgtaaccttatgaccaggccagagaatttgacctacaagattgtc
aaatacagcgacaactccgttcctttggtaagaacagatttggagatcttgagactcaag
aaagaaggcaaggatgtcgaaagaatcatcaaggtcgaaggtgatgaagctaccaagact
gctgtggttctcactatgcaattgggagtaagctcttatgccactatggctatgagagaa
ttcatgaaggctgatacttccagatggagcgaaaacatgatgaaaaaagaggagacgaaa
tag
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