Scheffersomyces stipitis: PICST_46672
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Entry
PICST_46672 CDS
T01023
Symbol
ASC1
Name
(RefSeq) WD repeat protein
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
pic
Scheffersomyces stipitis
Pathway
pic03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PICST_46672 (ASC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_46672 (ASC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_46672 (ASC1)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PICST_46672 (ASC1)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PICST_46672 (ASC1)
Exosomal proteins of colorectal cancer cells
PICST_46672 (ASC1)
Exosomal proteins of bladder cancer cells
PICST_46672 (ASC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Ge1_WD40
Cytochrom_D1
DUF7165
DSRM_MRPL44
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
4839261
NCBI-ProteinID:
XP_001385004
JGI:
46672
UniProt:
A3LWH7
LinkDB
All DBs
Position
5:1605754..1606911
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AA seq
317 aa
AA seq
DB search
MADQEVLVLRGTLEGHNGWVTSLSTTPAHPDLLLSGSRDKTLIRWKLTGGEDNQYGVPQK
SFKGHSHIVQDVTISADGAYALSASWDKTLRLWDLESGECTQRFVGHTGDVLSVSIAKNL
RQIVSASRDKTVKVWNTIGECMATLNGHSDWVSAVRISPSDNSSTVISASWDKTVKSWDL
LDYSVNADYIGHTGYISCITLSPDGSLCSSAGKDGVIILWDLNSNKTLYTLNANSEVHAL
AFSPNRYWLAAATSSGIKIFKLQERELLDELKPEFAIGAKAKDPEAISLAWSADGQNLFA
GYTDNVIRVWQVMTPSA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaagaagttttagttttgagaggtaccttagaaggtcacaacggatgggtt
acttccctttccaccaccccagctcacccagacttgttgttgtctggttccagagacaag
actttgatcagatggaagttgactggaggtgaagacaaccaatacggtgtcccacaaaag
tccttcaagggtcactcccacattgtccaagacgttaccatctctgctgacggtgcttac
gccttgtctgcttcttgggataagaccttgagattgtgggacttggaatctggtgaatgt
acccaaagattcgttggccacactggtgacgttttgtccgtctccatcgccaagaacttg
agacaaattgtctctgcttccagagacaagaccgtcaaggtctggaacaccatcggtgaa
tgtatggccaccttgaacggccactccgactgggtctctgccgtcagaatctctccatcc
gacaactcttccactgttatctctgcttcttgggataagactgttaagtcctgggacttg
ttggactactctgtcaacgctgactacattggacacaccggttacatttcctgcatcacc
ttgtccccagatggatctttgtgctcctctgctggtaaggacggtgttatcatcttgtgg
gacttgaactccaacaagactttgtacaccttgaacgccaactctgaagtccatgctttg
gctttctctccaaacagatactggttggctgctgccacctcttctggtatcaagatcttc
aagttgcaagaaagagaattgttggatgaattgaagccagaattcgctattggtgccaag
gccaaggacccagaagccatctctttggcttggtctgctgacggtcaaaacttgttcgcc
ggttacactgataacgttatcagagtctggcaagtcatgaccccatccgcttaa
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