KEGG   Scheffersomyces stipitis: PICST_46672
Entry
PICST_46672       CDS       T01023                                 
Symbol
ASC1
Name
(RefSeq) WD repeat protein
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
pic  Scheffersomyces stipitis
Pathway
pic03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    PICST_46672 (ASC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_46672 (ASC1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pic04147]
    PICST_46672 (ASC1)
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     PICST_46672 (ASC1)
Exosome [BR:pic04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   PICST_46672 (ASC1)
  Exosomal proteins of colorectal cancer cells
   PICST_46672 (ASC1)
  Exosomal proteins of bladder cancer cells
   PICST_46672 (ASC1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Ge1_WD40 Cytochrom_D1 DUF7165 DSRM_MRPL44 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 4839261
NCBI-ProteinID: XP_001385004
JGI: 46672
UniProt: A3LWH7
LinkDB
Position
5:1605754..1606911
AA seq 317 aa
MADQEVLVLRGTLEGHNGWVTSLSTTPAHPDLLLSGSRDKTLIRWKLTGGEDNQYGVPQK
SFKGHSHIVQDVTISADGAYALSASWDKTLRLWDLESGECTQRFVGHTGDVLSVSIAKNL
RQIVSASRDKTVKVWNTIGECMATLNGHSDWVSAVRISPSDNSSTVISASWDKTVKSWDL
LDYSVNADYIGHTGYISCITLSPDGSLCSSAGKDGVIILWDLNSNKTLYTLNANSEVHAL
AFSPNRYWLAAATSSGIKIFKLQERELLDELKPEFAIGAKAKDPEAISLAWSADGQNLFA
GYTDNVIRVWQVMTPSA
NT seq 954 nt   +upstreamnt  +downstreamnt
atggctgaccaagaagttttagttttgagaggtaccttagaaggtcacaacggatgggtt
acttccctttccaccaccccagctcacccagacttgttgttgtctggttccagagacaag
actttgatcagatggaagttgactggaggtgaagacaaccaatacggtgtcccacaaaag
tccttcaagggtcactcccacattgtccaagacgttaccatctctgctgacggtgcttac
gccttgtctgcttcttgggataagaccttgagattgtgggacttggaatctggtgaatgt
acccaaagattcgttggccacactggtgacgttttgtccgtctccatcgccaagaacttg
agacaaattgtctctgcttccagagacaagaccgtcaaggtctggaacaccatcggtgaa
tgtatggccaccttgaacggccactccgactgggtctctgccgtcagaatctctccatcc
gacaactcttccactgttatctctgcttcttgggataagactgttaagtcctgggacttg
ttggactactctgtcaacgctgactacattggacacaccggttacatttcctgcatcacc
ttgtccccagatggatctttgtgctcctctgctggtaaggacggtgttatcatcttgtgg
gacttgaactccaacaagactttgtacaccttgaacgccaactctgaagtccatgctttg
gctttctctccaaacagatactggttggctgctgccacctcttctggtatcaagatcttc
aagttgcaagaaagagaattgttggatgaattgaagccagaattcgctattggtgccaag
gccaaggacccagaagccatctctttggcttggtctgctgacggtcaaaacttgttcgcc
ggttacactgataacgttatcagagtctggcaagtcatgaccccatccgcttaa

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