KEGG   Scheffersomyces stipitis: PICST_47969
Entry
PICST_47969       CDS       T01023                                 
Symbol
SGS1
Name
(RefSeq) ATP-dependent DNA helicase
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03440  Homologous recombination
pic03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PICST_47969 (SGS1)
   03460 Fanconi anemia pathway
    PICST_47969 (SGS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pic03032]
    PICST_47969 (SGS1)
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_47969 (SGS1)
Enzymes [BR:pic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PICST_47969 (SGS1)
DNA replication proteins [BR:pic03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    PICST_47969 (SGS1)
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     PICST_47969 (SGS1)
    Bloom's syndrome complex (BTR)
     PICST_47969 (SGS1)
   FA (Fanconi anemia) pathway
     PICST_47969 (SGS1)
SSDB
Motif
Pfam: RQC DEAD Helicase_C RecQ_Zn_bind Helicase_Sgs1 HRDC ResIII Rhodanese
Other DBs
NCBI-GeneID: 4840279
NCBI-ProteinID: XP_001386017
JGI: 47969
UniProt: A3LYJ6
LinkDB
Position
6:complement(1663949..1667977)
AA seq 1148 aa
MINSNNLSVQVAWLQREAPHLPKKNLVDLVLQPFPESTRLLGRTGTGTNGEIRNGVSVLI
PSNSGNSNINNRNSNAQNNNSTSINTNDSITNTNKTNSTYNNNNSISNTGGSDLRQTANA
NNRSENSPNLDTLSDSEVALLKKLIELQDMKLALYDERFKVSESTSISFDAKKDFYKKTF
EPKSSAIEVQINNVRKEIYNSNSSHVQVNNSISVPEKLSVPSTFPASINSVPIVNEVEDD
FGEGTMDGLRTPTQERDEVNDLGSFIADDYLESDVDGSFQNDSDHSEEETEGAIAPDEID
DIRLSPDVAGKLGVRYVDQPAPIALVDSDSESVHKEYADDDYDDDEIEEIEDFTTQLNEE
RELNNDVIDLISDQEGENDLFEQHLPTNLAESGTHSKALGESTNIDRHIAPKVESDLEFS
DDDDELMNILNNQQPIVGNGPNKENIPPGSEHFIDEVYSVLNSVFKLQSFRSNQLEAVCA
SLQSKDVFVLMPTGGGKSLCYQLPALVKGGKTNGTTVVISPLISLMQDQVQHLLDKNVKA
GMISSKATAEENKQTMHLFREGFLDLVYLSPEKANTSNVVQKIISKLYETNRLARVVIDE
AHCLSSWGHDFRPDYQSMGLFKERYPNVPIMALTATANEKVRLDIVHNLKMENAVLLKQS
FNRTNLYYEIKWKAANYVEWIKDYILKNQNNKTGIIYCHSKQSCEQTSAKLNSFGLHTAF
YHAGMSPQDRFDIQSQWQTGRIQLICATIAFGMGIDKPDVRYVIHLFIPRSLEGYYQETG
RAGRDGKQSDCIMFYSYKDARSLQSMIQRDEELTKEGKENHLAKLRQVVQYCENTTDCRR
QQVLQYFNESFSPADCRKQCDNCQNSTGVSVVERNCTEYAKNIINLVQSIQEERVTVLHC
QDVFKGARNSKIMKMGHNLNPYHGKGSSLDKTDVERIFFYLLSEECLVEYQIMKGGFASN
YVRTGKNAYQVLRGMKQIQIQFSTEKRVRQNTGNASSTTSTSAVHSNLNSFKYRESFVTA
REVSRMNSMNSNANHAYNELNKIRIEASSEIGIPLSQFVSEISLREMSNKLPTNKRDFSK
IQGILKEQVEYFTLFKKTLGILSRERKKQSPNSSFVSNSDIASAGADMSISPYFPPPQPE
RHVLDNLR
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgataaattcaaataacctcctggtgcaggtggcgtggctccagcgagaagcaccacat
ctaccgaaaaagaatttggttgatctcgttctccagccttttccagaaagcacacggtta
ttaggacgcactggaactgggacaaacggagaaataaggaatggagttctggtgctaata
ccgtcaaattctggaaacagcaatataaataacagaaatctgaatgctcagaataataat
agtactagtatcaataccaacgatagcatcaccaataccaacaaaaccaatagtacttat
aataacaataatagcatatctaataccggcggttcagatttacgacagacagcaaacgcg
aacaacagactggaaaattctcccaatcttgatactctcagcgatagtgaagtcgcgctc
ttgaagaaattgatagagttacaggatatgaagctagcattatatgatgagcgcttcaaa
gtgagcgagtcgacttccatatcgtttgatgcaaagaaagatttctataagaaaacgttt
gaacccaagtccagtgccatagaagtccagattaacaatgtgcgaaaggagatctacaac
tccaattcttcacatgttcaagttaataacagtatctctgtaccggagaagctatcggtg
ccactgacattccctgcttctatcaactctgttccaatcgttaatgaagtcgaggatgac
tttggagaaggaaccatggatggattgagaaccccgacacaggagcgagatgaagtcaac
gatttgggcagctttattgccgacgactacttggagtctgatgttgatggttccttccaa
aatgattctgaccattcagaagaagaaacagaaggagcaattgccccagatgaaatcgat
gacataagactatcgccagatgtggcaggaaaattgggtgtgcggtatgttgatcaacca
gcccccatagctttggtagatctggattctgaatctgttcataaagaatatgcggatgat
gattatgacgatgatgaaattgaggaaatagaagacttcaccacgcaattaaatgaagaa
agagaattaaataatgatgtcattgacctcatttcagatcaagagggcgaaaatgatcta
ttcgaacaacatctcccaactaatttggcagaatcaggaacacattcaaaggcactcggt
gaatccaccaatattgacagacatatcgcgcctaaggtagaaagtgatctagaattcagt
gatgatgatgacgaattaatgaatatattgaacaatcagcagcctatcgttggaaatgga
cctaataaagagaatatacctccgggctctgaacatttcattgatgaagtatactctgta
ttaaattctgtcttcaaattgcagtcattcagatcaaatcaattggaagcagtgtgtgct
agtttgcaatctaaggatgtgtttgtattgatgccaacaggtggtggaaaatccttatgt
tatcagttgcctgcgcttgtgaaaggtgggaagactaatggtacaactgttgttatttct
cctttaatttcattgatgcaagatcaagttcagcacttattggacaagaatgtgaaagca
ggaatgatcagttccaaagcaacagcagaagagaataaacaaacaatgcatttattcagg
gagggctttcttgatttggtatatctttccccagaaaaagcaaacacttctaatgttgtc
caaaagataataagcaaattgtatgaaaccaacagattggccagagttgtgatagatgaa
gcacattgcttgagttcgtggggacatgatttcagacctgattatcagagtatggggctc
tttaaggagaggtatcccaatgttccaataatggccttaacagcaacggctaatgaaaag
gtaagattagatattgtccacaatttgaaaatggaaaatgccgttcttttgaaacaaagt
ttcaatagaacaaacttgtactatgaaattaagtggaaagcagccaactacgtcgaatgg
ataaaagattacattttgaaaaaccagaataataagacgggtatcatatattgtcattcg
aaacagtcctgtgaacagacaagtgctaaactcaatctgttcgggcttcatactgctttc
tatcacgctggaatgtctccccaagatagattcgatatccaatcacaatggcaaactgga
agaattcagttgatttgtgccacaattgctttcgggatgggaattgataagcccgacgtc
agatatgtcatccatttattcattcctcgaagtttggaaggatactaccaagaaaccgga
agagctggaagagatggcaaacaatctgattgtattatgttttactcttataaggacgct
cgactgcttcagagtatgatacaaagagacgaagaattgacgaaggaagggaaagaaaat
catcttgctaagcttagacaggtggttcaatattgtgagaacacaactgactgtagaaga
cagcaggttttgcaatacttcaacgagtctttcagcccggcagattgtcgaaagcaatgt
gacaattgccaaaattcaactggtgtttcagtggtcgaaagaaactgtacagagtatgcc
aaaaatatcataaatttggtgcaatctatccaggaagaaagagtgacagtacttcattgc
caggatgtctttaagggagccagaaatagcaaaattatgaaaatgggacataatcttaat
ccgtatcatgggaaagggagctccttggacaagacagacgtcgagagaatctttttctac
ctattgagtgaagagtgccttgtagaataccagatcatgaaaggtggatttgcgtcgaac
tacgtccgtaccggcaagaacgcataccaagttttgagaggaatgaagcagatccagatt
caattcagcactgagaaaagagtacggcaaaatactggaaatgcatcatcgactactagt
acatcagcagtacactccaatctcaacagtttcaaatatcgtgaatcgtttgtcacagca
cgtgaggtatcgaggatgaactcgatgaatagtaatgctaatcatgcttataatgagctt
aataagataagaattgaagctctgtcggagattggcatcccattgagtcagtttgtcagc
gagatatctctacgagaaatgtctaataaattgccgacgaacaagagagacttctctaaa
attcagggtatattaaaggaacaagttgaatatttcactctattcaagaagacgttgggt
atactatctagagaaaggaaaaagcaatcacccaactcgagttttgttagtaattcagac
atagccagtgctggtgcagatatgtctatttcgccatattttccaccaccccaacctgaa
cgtcatgttttggataacctaagg

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